1 HisKA_3#1
194-255 aa · 62 aa · 15.6% of protein
Raw token
HisKA_3:194:6.15e-19:255:62:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EXW34_RS01225
Histidine kinase, Classic
Bacillus mycoides · GCF_018741605
ClassHKTypeClassicLength397 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_018741605#EXW34_RS01225Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length397 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage151 / 397 aa (38.0%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa397 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
300-388 aa · 89 aa · 22.4% of protein
Raw token
HATPase_c:300:0.0000000000000564:388:107:109- Raw architecture: HisKA_3:194:6.15e-19:255:62:68#HATPase_c:300:0.0000000000000564:388:107:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_018741605::NZ_CP036102.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span215106-216952Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEXW34_01230RefSeq proteinWP_002191735.1
Context group ID
GCF_018741605::NZ_CP036102.1::G00001Context members
EXW34_RS01225EXW34_RS01230
Partner locus tags
EXW34_RS01225EXW34_RS01230
Partner old locus tags
EXW34_01230EXW34_01235
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_002191735.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEXW34_RS01225Primary locus identifier stored in the genes table.
Old locus tagEXW34_01230Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP036102.1Sequence record reported by the local genomic context database.
Genomic interval215 106-216 299 nt1 194 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span215 106-216 952 ntGCF_018741605::NZ_CP036102.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_018741605::NZ_CP036102.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP036102.1All displayed genes belong to this local TCS context.
Neighborhood span215 106-216 952 nt1 847 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
215 106 nt216 952 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EXW34_RS01225GCF_018741605#EXW34_RS01225
HKClassicCurrent focus
215 106-216 299 nt · Forward (+)
EXW34_RS01230GCF_018741605#EXW34_RS01230
RRNarL
216 296-216 952 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_018741605#EXW34_RS01225The current gene is the representative for this cluster.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2473282
Simplified PFAM architecture for HKOC_2473282
PFAM domain coverage: 151 / 397 aa (38.0%)
1 aa397 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[194-257] | HATPase_c[301-387]
- Domain count: 2
- Matched identifier: HKOC_2473282
- Positioned domains: HisKA_3 194-257 ; HATPase_c 301-387
Cluster members and taxonomy
Representative gene: GCF_018741605#EXW34_RS01225
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_018741605
AssemblyASM1874160v1 · Complete Genomehaploid
Genome composition6 066 244 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 125 · HK 68 · RR 57CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key