1 HisKA#1
234-298 aa · 65 aa · 14.3% of protein
Raw token
HisKA:234:0.0000000000376:298:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IMZ78_RS25160
Histidine kinase, Classic
Bacillus anthracis · GCF_014903775
ClassHKTypeClassicLength454 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_014903775#IMZ78_RS25160Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length454 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 454 aa (38.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa454 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
344-451 aa · 108 aa · 23.8% of protein
Raw token
HATPase_c:344:3.82e-20:451:108:109- Raw architecture: HisKA:234:0.0000000000376:298:65:64#HATPase_c:344:3.82e-20:451:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_014903775::NZ_JADBPS010000014.1::G00061
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span55331-57345Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIMZ78_25160RefSeq proteinWP_193110345.1
Context group ID
GCF_014903775::NZ_JADBPS010000014.1::G00061Context members
IMZ78_RS25160IMZ78_RS25165
Partner locus tags
IMZ78_RS25160IMZ78_RS25165
Partner old locus tags
IMZ78_25160IMZ78_25165
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_193110345.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIMZ78_RS25160Primary locus identifier stored in the genes table.
Old locus tagIMZ78_25160Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JADBPS010000014.1Sequence record reported by the local genomic context database.
Genomic interval55 331-56 695 nt1 365 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span55 331-57 345 ntGCF_014903775::NZ_JADBPS010000014.1::G00061
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_014903775::NZ_JADBPS010000014.1::G00061Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JADBPS010000014.1All displayed genes belong to this local TCS context.
Neighborhood span55 331-57 345 nt2 015 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
55 331 nt57 345 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
IMZ78_RS25160GCF_014903775#IMZ78_RS25160
HKClassicCurrent focus
55 331-56 695 nt · Reverse (-)
IMZ78_RS25165GCF_014903775#IMZ78_RS25165
RROmpR
56 683-57 345 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_014903775#IMZ78_RS25160The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1917307
Simplified PFAM architecture for HKOC_1917307
PFAM domain coverage: 172 / 454 aa (37.9%)
1 aa454 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[234-297] | HATPase_c[344-451]
- Domain count: 2
- Matched identifier: HKOC_1917307
- Positioned domains: HisKA 234-297 ; HATPase_c 344-451
Cluster members and taxonomy
Representative gene: GCF_014903775#IMZ78_RS25160
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 392 · GCF_014903775
AssemblyASM1490377v1 · Contighaploid
Genome composition5 238 597 bp · 35,0% GCBacillus anthracis
Signal transduction countsGenes 107 · HK 56 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key