1 HisKA#1
198-263 aa · 66 aa · 15.4% of protein
Raw token
HisKA:198:0.00000000000000348:263:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
G5A19_RS00115
Histidine kinase, Classic
Blautia faecis · GCF_013302415
ClassHKTypeClassicLength428 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_013302415#G5A19_RS00115Stable P2CS identifier used across views.
GenomeGCF_013302415Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length428 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage181 / 428 aa (42.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa428 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
308-422 aa · 115 aa · 26.9% of protein
Raw token
HATPase_c:308:3.62e-18:422:116:109- Raw architecture: HisKA:198:0.00000000000000348:263:66:64#HATPase_c:308:3.62e-18:422:116:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_013302415::NZ_JAAIPV010000001.1::G00013
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span25232-27194Genomic interval covered by the local TCS group.
Identifiers
Old locus tagG5A19_00115RefSeq proteinWP_173772944.1
Context group ID
GCF_013302415::NZ_JAAIPV010000001.1::G00013Context members
G5A19_RS00110G5A19_RS00115
Partner locus tags
G5A19_RS00110G5A19_RS00115
Partner old locus tags
G5A19_00110G5A19_00115
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_173772944.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagG5A19_RS00115Primary locus identifier stored in the genes table.
Old locus tagG5A19_00115Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAAIPV010000001.1Sequence record reported by the local genomic context database.
Genomic interval25 908-27 194 nt1 287 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span25 232-27 194 ntGCF_013302415::NZ_JAAIPV010000001.1::G00013
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_013302415::NZ_JAAIPV010000001.1::G00013Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAAIPV010000001.1All displayed genes belong to this local TCS context.
Neighborhood span25 232-27 194 nt1 963 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
25 232 nt27 194 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
G5A19_RS00110GCF_013302415#G5A19_RS00110
RROmpR
25 232-25 918 nt · Forward (+)
G5A19_RS00115GCF_013302415#G5A19_RS00115
HKClassicCurrent focus
25 908-27 194 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013302415#G5A19_RS00115The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2192530
Simplified PFAM architecture for HKOC_2192530
PFAM domain coverage: 177 / 428 aa (41.4%)
1 aa428 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[199-262] | HATPase_c[310-422]
- Domain count: 2
- Matched identifier: HKOC_2192530
- Positioned domains: HisKA 199-262 ; HATPase_c 310-422
Cluster members and taxonomy
Representative gene: GCF_013302415#G5A19_RS00115
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_013302415
AssemblyASM1330241v1 · Contighaploid
Genome composition4 177 763 bp · 43,0% GCBlautia faecis
Signal transduction countsGenes 126 · HK 64 · RR 60CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key