1 HisKA#1
229-293 aa · 65 aa · 14.0% of protein
Raw token
HisKA:229:0.0000000000449:293:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT705_RS15380
Histidine kinase, Classic
Blautia wexlerae · GCF_009881395
ClassHKTypeClassicLength464 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_009881395#GT705_RS15380Stable P2CS identifier used across views.
GenomeGCF_009881395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length464 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 464 aa (38.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa464 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
343-455 aa · 113 aa · 24.4% of protein
Raw token
HATPase_c:343:1.62e-20:455:113:109- Raw architecture: HisKA:229:0.0000000000449:293:65:64#HATPase_c:343:1.62e-20:455:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_009881395::NZ_WWVG01000059.1::G00063
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span8983-11069Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT705_15430RefSeq proteinWP_161275789.1
Context group ID
GCF_009881395::NZ_WWVG01000059.1::G00063Context members
GT705_RS15380GT705_RS15385
Partner locus tags
GT705_RS15380GT705_RS15385
Partner old locus tags
GT705_15430GT705_15435
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_161275789.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8XNW8Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8XNW8_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT705_RS15380Primary locus identifier stored in the genes table.
Old locus tagGT705_15430Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVG01000059.1Sequence record reported by the local genomic context database.
Genomic interval8 983-10 377 nt1 395 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span8 983-11 069 ntGCF_009881395::NZ_WWVG01000059.1::G00063
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881395::NZ_WWVG01000059.1::G00063Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVG01000059.1All displayed genes belong to this local TCS context.
Neighborhood span8 983-11 069 nt2 087 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
8 983 nt11 069 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
GT705_RS15380GCF_009881395#GT705_RS15380
HKClassicCurrent focus
8 983-10 377 nt · Reverse (-)
GT705_RS15385GCF_009881395#GT705_RS15385
RROmpR
10 377-11 069 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881235#GT685_RS00085Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1787666
Simplified PFAM architecture for HKOC_1787666
PFAM domain coverage: 176 / 464 aa (37.9%)
1 aa464 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[230-293] | HATPase_c[343-454]
- Domain count: 2
- Matched identifier: HKOC_1787666
- Positioned domains: HisKA 230-293 ; HATPase_c 343-454
Cluster members and taxonomy
Representative gene: GCF_009881235#GT685_RS00085
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881395
AssemblyASM988139v1 · Contighaploid
Genome composition4 112 044 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 138 · HK 66 · RR 70CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key