1 Response_reg#1
5-114 aa · 110 aa · 62.1% of protein
Raw token
Response_reg:5:1.09e-28:114:110:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT705_RS00665
Response regulator, unclassified
Blautia wexlerae · GCF_009881395
ClassRRTypeunclassifiedLength177 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_009881395#GT705_RS00665Stable P2CS identifier used across views.
GenomeGCF_009881395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length177 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage110 / 177 aa (62.1%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa177 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:5:1.09e-28:114:110:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_009881395::NZ_WWVG01000002.1::G00030
Group size11 locus tag listed below.
HK / RR0 / 1Counts resolved for the local TCS neighborhood.
Context span1-530Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT705_00665RefSeq proteinWP_161298903.1
Context group ID
GCF_009881395::NZ_WWVG01000002.1::G00030Context members
GT705_RS00665
Partner locus tags
GT705_RS00665
Partner old locus tags
GT705_00665
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_161298903.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT705_RS00665Primary locus identifier stored in the genes table.
Old locus tagGT705_00665Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVG01000002.1Sequence record reported by the local genomic context database.
Genomic interval1-530 nt530 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1-530 ntGCF_009881395::NZ_WWVG01000002.1::G00030
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881395::NZ_WWVG01000002.1::G00030Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVG01000002.1All displayed genes belong to this local TCS context.
Neighborhood span1-530 nt530 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 nt530 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
GT705_RS00665GCF_009881395#GT705_RS00665
RRunclassifiedCurrent focus
1-530 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881395#GT705_RS00665The current gene is the representative for this cluster.
PFAM architectureResponse_reg1 domain in the representative PFAM annotation.
PFAM architecture for RROC_2191046
Simplified PFAM architecture for RROC_2191046
PFAM domain coverage: 109 / 177 aa (61.6%)
1 aa177 aa
Response_reg
- Simplified architecture: Response_reg
- Raw architecture: Response_reg[5-113]
- Domain count: 1
- Matched identifier: RROC_2191046
- Positioned domains: Response_reg 5-113 ; Response_reg 5-113
Cluster members and taxonomy
Representative gene: GCF_009881395#GT705_RS00665
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881395
AssemblyASM988139v1 · Contighaploid
Genome composition4 112 044 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 138 · HK 66 · RR 70CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key