1 Response_reg#1
1-102 aa · 102 aa · 94.4% of protein
Raw token
Response_reg:1:7.5e-24:102:102:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT705_RS07320
Response regulator, CheY family
Blautia wexlerae · GCF_009881395
ClassRRTypeCheYLength108 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_009881395#GT705_RS07320Stable P2CS identifier used across views.
GenomeGCF_009881395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length108 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage102 / 108 aa (94.4%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa108 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:1:7.5e-24:102:102:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_009881395::NZ_WWVG01000017.1::G00015
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1-2426Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT705_07340RefSeq proteinWP_161298918.1
Context group ID
GCF_009881395::NZ_WWVG01000017.1::G00015Context members
GT705_RS07320GT705_RS07325
Partner locus tags
GT705_RS07320GT705_RS07325
Partner old locus tags
GT705_07340GT705_07345
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_161298918.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT705_RS07320Primary locus identifier stored in the genes table.
Old locus tagGT705_07340Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVG01000017.1Sequence record reported by the local genomic context database.
Genomic interval1-329 nt329 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1-2 426 ntGCF_009881395::NZ_WWVG01000017.1::G00015
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881395::NZ_WWVG01000017.1::G00015Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVG01000017.1All displayed genes belong to this local TCS context.
Neighborhood span1-2 426 nt2 426 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 nt2 426 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
GT705_RS07320GCF_009881395#GT705_RS07320
RRCheYCurrent focus
1-329 nt · Forward (+)
GT705_RS07325GCF_009881395#GT705_RS07325
HKHybrid
366-2 426 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881255#GT672_RS17940Use this link to inspect the representative gene detail.
PFAM architectureResponse_reg1 domain in the representative PFAM annotation.
PFAM architecture for RROC_2201601
Simplified PFAM architecture for RROC_2201601
PFAM domain coverage: 117 / 166 aa (70.5%)
1 aa166 aa
Response_reg
- Simplified architecture: Response_reg
- Raw architecture: Response_reg[43-159]
- Domain count: 1
- Matched identifier: RROC_2201601
- Positioned domains: Response_reg 43-159 ; Response_reg 43-159
Cluster members and taxonomy
Representative gene: GCF_009881255#GT672_RS17940
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881395
AssemblyASM988139v1 · Contighaploid
Genome composition4 112 044 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 138 · HK 66 · RR 70CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key