1 HisKA#1
14-76 aa · 63 aa · 27.8% of protein
Raw token
HisKA:14:0.0000000829:76:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT705_RS05375
Histidine kinase, Classic
Blautia wexlerae · GCF_009881395
ClassHKTypeClassicLength227 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_009881395#GT705_RS05375Stable P2CS identifier used across views.
GenomeGCF_009881395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length227 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage170 / 227 aa (74.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa227 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
120-226 aa · 107 aa · 47.1% of protein
Raw token
HATPase_c:120:1.9e-28:226:110:109- Raw architecture: HisKA:14:0.0000000829:76:63:64#HATPase_c:120:1.9e-28:226:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_009881395::NZ_WWVG01000011.1::G00010
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span60498-61181Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT705_05395RefSeq proteinWP_161233250.1
Context group ID
GCF_009881395::NZ_WWVG01000011.1::G00010Context members
GT705_RS05375
Partner locus tags
GT705_RS05375
Partner old locus tags
GT705_05395
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_161233250.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8SX05Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8SX05_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT705_RS05375Primary locus identifier stored in the genes table.
Old locus tagGT705_05395Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVG01000011.1Sequence record reported by the local genomic context database.
Genomic interval60 498-61 181 nt684 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span60 498-61 181 ntGCF_009881395::NZ_WWVG01000011.1::G00010
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881395::NZ_WWVG01000011.1::G00010Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVG01000011.1All displayed genes belong to this local TCS context.
Neighborhood span60 498-61 181 nt684 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
60 498 nt61 181 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
GT705_RS05375GCF_009881395#GT705_RS05375
HKClassicCurrent focus
60 498-61 181 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009876865#GT728_RS01160Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2926804
Simplified PFAM architecture for HKOC_2926804
PFAM domain coverage: 106 / 227 aa (46.7%)
1 aa227 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[120-225]
- Domain count: 1
- Matched identifier: HKOC_2926804
- Positioned domains: HATPase_c 120-225
Cluster members and taxonomy
Representative gene: GCF_009876865#GT728_RS01160
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881395
AssemblyASM988139v1 · Contighaploid
Genome composition4 112 044 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 138 · HK 66 · RR 70CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key