1 HisKA#1
123-189 aa · 67 aa · 19.5% of protein
Raw token
HisKA:123:0.00000399:189:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
GT705_RS04610
Histidine kinase, Classic
Blautia wexlerae · GCF_009881395
ClassHKTypeClassicLength343 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_009881395#GT705_RS04610Stable P2CS identifier used across views.
GenomeGCF_009881395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length343 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage176 / 343 aa (51.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa343 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
235-343 aa · 109 aa · 31.8% of protein
Raw token
HATPase_c:235:3.41e-28:343:109:109- Raw architecture: HisKA:123:0.00000399:189:67:64#HATPase_c:235:3.41e-28:343:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_009881395::NZ_WWVG01000010.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span6139-7856Genomic interval covered by the local TCS group.
Identifiers
Old locus tagGT705_04620RefSeq proteinWP_161276001.1
Context group ID
GCF_009881395::NZ_WWVG01000010.1::G00004Context members
GT705_RS04610GT705_RS04615
Partner locus tags
GT705_RS04610GT705_RS04615
Partner old locus tags
GT705_04620GT705_04625
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_161276001.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8XT70Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8XT70_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagGT705_RS04610Primary locus identifier stored in the genes table.
Old locus tagGT705_04620Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_WWVG01000010.1Sequence record reported by the local genomic context database.
Genomic interval6 139-7 170 nt1 032 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span6 139-7 856 ntGCF_009881395::NZ_WWVG01000010.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_009881395::NZ_WWVG01000010.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_WWVG01000010.1All displayed genes belong to this local TCS context.
Neighborhood span6 139-7 856 nt1 718 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
6 139 nt7 856 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
GT705_RS04610GCF_009881395#GT705_RS04610
HKClassicCurrent focus
6 139-7 170 nt · Reverse (-)
GT705_RS04615GCF_009881395#GT705_RS04615
RROmpR
7 167-7 856 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009881235#GT685_RS06120Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2829350
Simplified PFAM architecture for HKOC_2829350
PFAM domain coverage: 173 / 343 aa (50.4%)
1 aa343 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[125-189] | HATPase_c[235-342]
- Domain count: 2
- Matched identifier: HKOC_2829350
- Positioned domains: HisKA 125-189 ; HATPase_c 235-342
Cluster members and taxonomy
Representative gene: GCF_009881235#GT685_RS06120
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_009881395
AssemblyASM988139v1 · Contighaploid
Genome composition4 112 044 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 138 · HK 66 · RR 70CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key