1 HisKA#1
124-189 aa · 66 aa · 19.2% of protein
Raw token
HisKA:124:0.00000184:189:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWX32_RS04825
Histidine kinase, Classic
Blautia sp. AF19-13LB · GCF_003479105
ClassHKTypeClassicLength343 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003479105#DWX32_RS04825Stable P2CS identifier used across views.
GenomeGCF_003479105Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length343 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage175 / 343 aa (51.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa343 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
235-343 aa · 109 aa · 31.8% of protein
Raw token
HATPase_c:235:8.3e-29:343:109:109- Raw architecture: HisKA:124:0.00000184:189:66:64#HATPase_c:235:8.3e-29:343:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003479105::NZ_QUGO01000003.1::G00040
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span233088-234799Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWX32_04825RefSeq proteinWP_117461331.1
Context group ID
GCF_003479105::NZ_QUGO01000003.1::G00040Context members
DWX32_RS04820DWX32_RS04825
Partner locus tags
DWX32_RS04820DWX32_RS04825
Partner old locus tags
DWX32_04820DWX32_04825
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117461331.1Primary protein accession used for annex mappings.
UniProt accessionA0A8J6M5J4Primary UniProt accession resolved in the annex database.
UniProt IDA0A8J6M5J4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWX32_RS04825Primary locus identifier stored in the genes table.
Old locus tagDWX32_04825Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUGO01000003.1Sequence record reported by the local genomic context database.
Genomic interval233 768-234 799 nt1 032 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span233 088-234 799 ntGCF_003479105::NZ_QUGO01000003.1::G00040
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003479105::NZ_QUGO01000003.1::G00040Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUGO01000003.1All displayed genes belong to this local TCS context.
Neighborhood span233 088-234 799 nt1 712 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
233 088 nt234 799 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DWX32_RS04820GCF_003479105#DWX32_RS04820
RROmpR
233 088-233 771 nt · Forward (+)
DWX32_RS04825GCF_003479105#DWX32_RS04825
HKClassicCurrent focus
233 768-234 799 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003434125#DW905_RS12885Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2828787
Simplified PFAM architecture for HKOC_2828787
PFAM domain coverage: 174 / 343 aa (50.7%)
1 aa343 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[124-189] | HATPase_c[235-342]
- Domain count: 2
- Matched identifier: HKOC_2828787
- Positioned domains: HisKA 124-189 ; HATPase_c 235-342
Cluster members and taxonomy
Representative gene: GCF_003434125#DW905_RS12885
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 962 · GCF_003479105
AssemblyASM347910v1 · Scaffoldhaploid
Genome composition4 009 812 bp · 47,5% GCBlautia sp. AF19-13LB
Signal transduction countsGenes 99 · HK 49 · RR 47CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key