1 HisKA_3#1
181-245 aa · 65 aa · 17.5% of protein
Raw token
HisKA_3:181:0.0000000000000666:245:67:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWW21_RS14530
Histidine kinase, Classic
Blautia obeum · GCF_003465235
ClassHKTypeClassicLength371 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003465235#DWW21_RS14530Stable P2CS identifier used across views.
GenomeGCF_003465235Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length371 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage149 / 371 aa (40.2%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa371 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
285-368 aa · 84 aa · 22.6% of protein
Raw token
HATPase_c:285:0.000000000026:368:101:109- Raw architecture: HisKA_3:181:0.0000000000000666:245:67:68#HATPase_c:285:0.000000000026:368:101:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003465235::NZ_QRYY01000012.1::G00016
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span35907-37668Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWW21_14540RefSeq proteinWP_243007653.1
Context group ID
GCF_003465235::NZ_QRYY01000012.1::G00016Context members
DWW21_RS14525DWW21_RS14530
Partner locus tags
DWW21_RS14525DWW21_RS14530
Partner old locus tags
DWW21_14535DWW21_14540
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_243007653.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWW21_RS14530Primary locus identifier stored in the genes table.
Old locus tagDWW21_14540Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QRYY01000012.1Sequence record reported by the local genomic context database.
Genomic interval36 553-37 668 nt1 116 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span35 907-37 668 ntGCF_003465235::NZ_QRYY01000012.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003465235::NZ_QRYY01000012.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QRYY01000012.1All displayed genes belong to this local TCS context.
Neighborhood span35 907-37 668 nt1 762 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
35 907 nt37 668 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DWW21_RS14525GCF_003465235#DWW21_RS14525
RRNarL
35 907-36 527 nt · Reverse (-)
DWW21_RS14530GCF_003465235#DWW21_RS14530
HKClassicCurrent focus
36 553-37 668 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003465235#DWW21_RS14530The current gene is the representative for this cluster.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2677441
Simplified PFAM architecture for HKOC_2677441
PFAM domain coverage: 148 / 371 aa (39.9%)
1 aa371 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[181-244] | HATPase_c[284-367]
- Domain count: 2
- Matched identifier: HKOC_2677441
- Positioned domains: HisKA_3 181-244 ; HATPase_c 284-367
Cluster members and taxonomy
Representative gene: GCF_003465235#DWW21_RS14530
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003465235
AssemblyASM346523v1 · Scaffoldhaploid
Genome composition3 879 097 bp · 42,0% GCBlautia obeum
Signal transduction countsGenes 102 · HK 53 · RR 48CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key