1 HisKA#1
89-152 aa · 64 aa · 20.8% of protein
Raw token
HisKA:89:0.000000000583:152:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXA55_RS14970
Histidine kinase, Classic
Blautia sp. OF03-13 · GCF_003460685
ClassHKTypeClassicLength307 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003460685#DXA55_RS14970Stable P2CS identifier used across views.
GenomeGCF_003460685Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length307 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 307 aa (56.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa307 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
199-306 aa · 108 aa · 35.2% of protein
Raw token
HATPase_c:199:9.36e-28:306:108:109- Raw architecture: HisKA:89:0.000000000583:152:64:64#HATPase_c:199:9.36e-28:306:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003460685::NZ_QTVR01000025.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span30853-32476Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXA55_14995RefSeq proteinWP_005933807.1
Context group ID
GCF_003460685::NZ_QTVR01000025.1::G00022Context members
DXA55_RS14965DXA55_RS14970
Partner locus tags
DXA55_RS14965DXA55_RS14970
Partner old locus tags
DXA55_14990DXA55_14995
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_005933807.1Primary protein accession used for annex mappings.
UniProt accessionC7H740Primary UniProt accession resolved in the annex database.
UniProt IDC7H740_FAED2Display identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXA55_RS14970Primary locus identifier stored in the genes table.
Old locus tagDXA55_14995Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QTVR01000025.1Sequence record reported by the local genomic context database.
Genomic interval31 553-32 476 nt924 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span30 853-32 476 ntGCF_003460685::NZ_QTVR01000025.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003460685::NZ_QTVR01000025.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QTVR01000025.1All displayed genes belong to this local TCS context.
Neighborhood span30 853-32 476 nt1 624 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
30 853 nt32 476 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXA55_RS14965GCF_003460685#DXA55_RS14965
RROmpR
30 853-31 551 nt · Forward (+)
DXA55_RS14970GCF_003460685#DXA55_RS14970
HKClassicCurrent focus
31 553-32 476 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000162015#FAEPRAA2165_RS08890Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2880544
Simplified PFAM architecture for HKOC_2880544
PFAM domain coverage: 171 / 307 aa (55.7%)
1 aa307 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[89-152] | HATPase_c[200-306]
- Domain count: 2
- Matched identifier: HKOC_2880544
- Positioned domains: HisKA 89-152 ; HATPase_c 200-306
Cluster members and taxonomy
Representative gene: GCF_000162015#FAEPRAA2165_RS08890
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 292 980 · GCF_003460685
AssemblyASM346068v1 · Contighaploid
Genome composition3 545 221 bp · 47,0% GCBlautia sp. OF03-13
Signal transduction countsGenes 81 · HK 41 · RR 37CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key