1 HisKA#1
42-108 aa · 67 aa · 12.2% of protein
Raw token
HisKA:42:1.16e-17:108:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW687_RS05280
Histidine kinase, Hybrid
Anaerofustis stercorihominis · GCF_003435385
ClassHKTypeHybridLength551 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003435385#DW687_RS05280Stable P2CS identifier used across views.
GenomeGCF_003435385Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length551 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 551 aa (55.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa551 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
155-272 aa · 118 aa · 21.4% of protein
Raw token
HATPase_c:155:2.16e-27:272:118:1093 Response_reg#3
425-542 aa · 118 aa · 21.4% of protein
Raw token
Response_reg:425:1.78e-27:542:118:111- Raw architecture: HisKA:42:1.16e-17:108:67:64#HATPase_c:155:2.16e-27:272:118:109#Response_reg:425:1.78e-27:542:118:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003435385::NZ_QUSM01000003.1::G00017
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span121606-123261Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW687_05275RefSeq proteinWP_181965848.1
Context group ID
GCF_003435385::NZ_QUSM01000003.1::G00017Context members
DW687_RS05280
Partner locus tags
DW687_RS05280
Partner old locus tags
DW687_05275
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_181965848.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW687_RS05280Primary locus identifier stored in the genes table.
Old locus tagDW687_05275Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUSM01000003.1Sequence record reported by the local genomic context database.
Genomic interval121 606-123 261 nt1 656 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span121 606-123 261 ntGCF_003435385::NZ_QUSM01000003.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003435385::NZ_QUSM01000003.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUSM01000003.1All displayed genes belong to this local TCS context.
Neighborhood span121 606-123 261 nt1 656 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
121 606 nt123 261 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DW687_RS05280GCF_003435385#DW687_RS05280
HKHybridCurrent focus
121 606-123 261 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003435385#DW687_RS05280The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1290329
Simplified PFAM architecture for HKOC_1290329
PFAM domain coverage: 300 / 551 aa (54.4%)
1 aa551 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[42-108] | HATPase_c[156-271] | Response_reg[425-541]
- Domain count: 3
- Matched identifier: HKOC_1290329
- Positioned domains: HisKA 42-108 ; HATPase_c 156-271 ; Response_reg 425-541
Cluster members and taxonomy
Representative gene: GCF_003435385#DW687_RS05280
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_003435385
AssemblyASM343538v1 · Scaffoldhaploid
Genome composition2 409 730 bp · 34,0% GCAnaerofustis stercorihominis
Signal transduction countsGenes 39 · HK 25 · RR 13CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key