1 HisKA#1
218-283 aa · 66 aa · 11.2% of protein
Raw token
HisKA:218:4.86e-18:283:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW687_RS05035
Histidine kinase, Hybrid
Anaerofustis stercorihominis · GCF_003435385
ClassHKTypeHybridLength591 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003435385#DW687_RS05035Stable P2CS identifier used across views.
GenomeGCF_003435385Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length591 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage298 / 591 aa (50.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa591 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
332-446 aa · 115 aa · 19.5% of protein
Raw token
HATPase_c:332:2.71e-32:446:115:1093 Response_reg#3
469-585 aa · 117 aa · 19.8% of protein
Raw token
Response_reg:469:3.88e-26:585:117:111- Raw architecture: HisKA:218:4.86e-18:283:66:64#HATPase_c:332:2.71e-32:446:115:109#Response_reg:469:3.88e-26:585:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003435385::NZ_QUSM01000003.1::G00015
Group size22 locus tags listed below.
HK / RR2 / 0Counts resolved for the local TCS neighborhood.
Context span54827-59574Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW687_05030RefSeq proteinWP_117531988.1
Context group ID
GCF_003435385::NZ_QUSM01000003.1::G00015Context members
DW687_RS05035DW687_RS05040
Partner locus tags
DW687_RS05035DW687_RS05040
Partner old locus tags
DW687_05030DW687_05035
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117531988.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E3DXY7Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E3DXY7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW687_RS05035Primary locus identifier stored in the genes table.
Old locus tagDW687_05030Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUSM01000003.1Sequence record reported by the local genomic context database.
Genomic interval54 827-56 602 nt1 776 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span54 827-59 574 ntGCF_003435385::NZ_QUSM01000003.1::G00015
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003435385::NZ_QUSM01000003.1::G00015Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUSM01000003.1All displayed genes belong to this local TCS context.
Neighborhood span54 827-59 574 nt4 748 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
54 827 nt59 574 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW687_RS05035GCF_003435385#DW687_RS05035
HKHybridCurrent focus
54 827-56 602 nt · Forward (+)
DW687_RS05040GCF_003435385#DW687_RS05040
HKHybrid
56 788-59 574 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003435385#DW687_RS05035The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1106392
Simplified PFAM architecture for HKOC_1106392
PFAM domain coverage: 296 / 591 aa (50.1%)
1 aa591 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[218-283] | HATPase_c[332-444] | Response_reg[469-585]
- Domain count: 3
- Matched identifier: HKOC_1106392
- Positioned domains: HisKA 218-283 ; HATPase_c 332-444 ; Response_reg 469-585
Cluster members and taxonomy
Representative gene: GCF_003435385#DW687_RS05035
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_003435385
AssemblyASM343538v1 · Scaffoldhaploid
Genome composition2 409 730 bp · 34,0% GCAnaerofustis stercorihominis
Signal transduction countsGenes 39 · HK 25 · RR 13CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key