1 HisKA#1
286-352 aa · 67 aa · 8.7% of protein
Raw token
HisKA:286:3.92e-18:352:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW687_RS00400
Histidine kinase, Hybrid
Anaerofustis stercorihominis · GCF_003435385
ClassHKTypeHybridLength772 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003435385#DW687_RS00400Stable P2CS identifier used across views.
GenomeGCF_003435385Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length772 aaLength used to scale native and Biotite-like views.
Annotated domains44 with usable coordinates.
Domain coverage395 / 772 aa (51.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,2 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa772 aa
Domain-by-domain annotation4 items
2 HATPase_c#2
400-517 aa · 118 aa · 15.3% of protein
Raw token
HATPase_c:400:1.69e-29:517:119:1093 Response_reg#3
535-626 aa · 92 aa · 11.9% of protein
Raw token
Response_reg:535:3.63e-16:626:94:1114 Response_reg#4
652-769 aa · 118 aa · 15.3% of protein
Raw token
Response_reg:652:1.17e-25:769:118:111- Raw architecture: HisKA:286:3.92e-18:352:67:64#HATPase_c:400:1.69e-29:517:119:109#Response_reg:535:3.63e-16:626:94:111#Response_reg:652:1.17e-25:769:118:111
- Domain description: 1 HisKA,1 HATPase_c,2 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003435385::NZ_QUSM01000001.1::G00002
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span73720-76038Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW687_00400RefSeq proteinWP_117530891.1
Context group ID
GCF_003435385::NZ_QUSM01000001.1::G00002Context members
DW687_RS00400
Partner locus tags
DW687_RS00400
Partner old locus tags
DW687_00400
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117530891.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E3E2L4Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E3E2L4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW687_RS00400Primary locus identifier stored in the genes table.
Old locus tagDW687_00400Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QUSM01000001.1Sequence record reported by the local genomic context database.
Genomic interval73 720-76 038 nt2 319 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span73 720-76 038 ntGCF_003435385::NZ_QUSM01000001.1::G00002
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003435385::NZ_QUSM01000001.1::G00002Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QUSM01000001.1All displayed genes belong to this local TCS context.
Neighborhood span73 720-76 038 nt2 319 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
73 720 nt76 038 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DW687_RS00400GCF_003435385#DW687_RS00400
HKHybridCurrent focus
73 720-76 038 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003435385#DW687_RS00400The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg + Response_reg4 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0614422
Simplified PFAM architecture for HKOC_0614422
PFAM domain coverage: 392 / 772 aa (50.8%)
1 aa772 aa
HisKAHATPase_cResponse_regResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg + Response_reg
- Raw architecture: HisKA[286-352] | HATPase_c[400-516] | Response_reg[535-625] | Response_reg[652-768]
- Domain count: 4
- Matched identifier: HKOC_0614422
- Positioned domains: HisKA 286-352 ; HATPase_c 400-516 ; Response_reg 535-625 ; Response_reg 652-768
Cluster members and taxonomy
Representative gene: GCF_003435385#DW687_RS00400
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_003435385
AssemblyASM343538v1 · Scaffoldhaploid
Genome composition2 409 730 bp · 34,0% GCAnaerofustis stercorihominis
Signal transduction countsGenes 39 · HK 25 · RR 13CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key