1 HisKA#1
293-355 aa · 63 aa · 12.3% of protein
Raw token
HisKA:293:0.0000413:355:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWZ89_RS00810
Histidine kinase, Classic
Faecalibacterium prausnitzii · GCF_003433865
ClassHKTypeClassicLength512 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003433865#DWZ89_RS00810Stable P2CS identifier used across views.
GenomeGCF_003433865Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Faecalibacterium
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length512 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 512 aa (33.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa512 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
401-509 aa · 109 aa · 21.3% of protein
Raw token
HATPase_c:401:3.51e-34:509:109:109- Raw architecture: HisKA:293:0.0000413:355:63:64#HATPase_c:401:3.51e-34:509:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003433865::NZ_QVEQ01000001.1::G00001
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span173998-175536Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWZ89_00810RefSeq proteinWP_117503971.1
Context group ID
GCF_003433865::NZ_QVEQ01000001.1::G00001Context members
DWZ89_RS00810
Partner locus tags
DWZ89_RS00810
Partner old locus tags
DWZ89_00810
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117503971.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E2TDT5Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E2TDT5_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWZ89_RS00810Primary locus identifier stored in the genes table.
Old locus tagDWZ89_00810Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QVEQ01000001.1Sequence record reported by the local genomic context database.
Genomic interval173 998-175 536 nt1 539 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span173 998-175 536 ntGCF_003433865::NZ_QVEQ01000001.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003433865::NZ_QVEQ01000001.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QVEQ01000001.1All displayed genes belong to this local TCS context.
Neighborhood span173 998-175 536 nt1 539 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
173 998 nt175 536 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DWZ89_RS00810GCF_003433865#DWZ89_RS00810
HKClassicCurrent focus
173 998-175 536 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003433865#DWZ89_RS00810The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_1420453
Simplified PFAM architecture for HKOC_1420453
PFAM domain coverage: 109 / 512 aa (21.3%)
1 aa512 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[401-509]
- Domain count: 1
- Matched identifier: HKOC_1420453
- Positioned domains: HATPase_c 401-509
Cluster members and taxonomy
Representative gene: GCF_003433865#DWZ89_RS00810
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 853 · GCF_003433865
AssemblyASM343386v1 · Scaffoldhaploid
Genome composition2 975 205 bp · 56,5% GCFaecalibacterium prausnitzii
Signal transduction countsGenes 43 · HK 19 · RR 23CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyOscillospiraceaeGenusFaecalibacterium
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Oscillospiraceae7Faecalibacterium
Related genes
Preview from the same derived genome key