1 HisKA#1
87-150 aa · 64 aa · 21.0% of protein
Raw token
HisKA:87:0.0000000617:150:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW244_RS07395
Histidine kinase, Classic
Streptococcus pasteurianus · GCF_003433675
ClassHKTypeClassicLength305 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003433675#DW244_RS07395Stable P2CS identifier used across views.
GenomeGCF_003433675Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length305 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 305 aa (56.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa305 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
197-304 aa · 108 aa · 35.4% of protein
Raw token
HATPase_c:197:3.41e-27:304:108:109- Raw architecture: HisKA:87:0.0000000617:150:64:64#HATPase_c:197:3.41e-27:304:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003433675::NZ_QVEM01000009.1::G00017
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span87149-88767Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW244_07395RefSeq proteinWP_069789011.1
Context group ID
GCF_003433675::NZ_QVEM01000009.1::G00017Context members
DW244_RS07390DW244_RS07395
Partner locus tags
DW244_RS07390DW244_RS07395
Partner old locus tags
DW244_07390DW244_07395
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_069789011.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW244_RS07395Primary locus identifier stored in the genes table.
Old locus tagDW244_07395Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QVEM01000009.1Sequence record reported by the local genomic context database.
Genomic interval87 850-88 767 nt918 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span87 149-88 767 ntGCF_003433675::NZ_QVEM01000009.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003433675::NZ_QVEM01000009.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QVEM01000009.1All displayed genes belong to this local TCS context.
Neighborhood span87 149-88 767 nt1 619 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
87 149 nt88 767 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW244_RS07390GCF_003433675#DW244_RS07390
RROmpR
87 149-87 847 nt · Forward (+)
DW244_RS07395GCF_003433675#DW244_RS07395
HKClassicCurrent focus
87 850-88 767 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001746975#BJG09_RS03205Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2882221
Simplified PFAM architecture for HKOC_2882221
PFAM domain coverage: 171 / 305 aa (56.1%)
1 aa305 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[87-150] | HATPase_c[197-303]
- Domain count: 2
- Matched identifier: HKOC_2882221
- Positioned domains: HisKA 87-150 ; HATPase_c 197-303
Cluster members and taxonomy
Representative gene: GCF_001746975#BJG09_RS03205
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 197 614 · GCF_003433675
AssemblyASM343367v1 · Scaffoldhaploid
Genome composition2 217 913 bp · 37,5% GCStreptococcus pasteurianus
Signal transduction countsGenes 34 · HK 16 · RR 17CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyStreptococcaceaeGenusStreptococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Streptococcaceae7Streptococcus
Related genes
Preview from the same derived genome key