1 HisKA#1
225-292 aa · 68 aa · 15.2% of protein
Raw token
HisKA:225:0.0000000000328:292:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW244_RS01585
Histidine kinase, Classic
Streptococcus pasteurianus · GCF_003433675
ClassHKTypeClassicLength446 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003433675#DW244_RS01585Stable P2CS identifier used across views.
GenomeGCF_003433675Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length446 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage176 / 446 aa (39.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa446 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
336-443 aa · 108 aa · 24.2% of protein
Raw token
HATPase_c:336:6.92e-28:443:108:109- Raw architecture: HisKA:225:0.0000000000328:292:68:64#HATPase_c:336:6.92e-28:443:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003433675::NZ_QVEM01000002.1::G00006
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span101033-103037Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW244_01585RefSeq proteinWP_003064880.1
Context group ID
GCF_003433675::NZ_QVEM01000002.1::G00006Context members
DW244_RS01580DW244_RS01585
Partner locus tags
DW244_RS01580DW244_RS01585
Partner old locus tags
DW244_01580DW244_01585
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_003064880.1Primary protein accession used for annex mappings.
UniProt accessionA0A2I1YH16Primary UniProt accession resolved in the annex database.
UniProt IDA0A2I1YH16_STRMCDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW244_RS01585Primary locus identifier stored in the genes table.
Old locus tagDW244_01585Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QVEM01000002.1Sequence record reported by the local genomic context database.
Genomic interval101 697-103 037 nt1 341 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span101 033-103 037 ntGCF_003433675::NZ_QVEM01000002.1::G00006
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003433675::NZ_QVEM01000002.1::G00006Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QVEM01000002.1All displayed genes belong to this local TCS context.
Neighborhood span101 033-103 037 nt2 005 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
101 033 nt103 037 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW244_RS01580GCF_003433675#DW244_RS01580
RROmpR
101 033-101 707 nt · Forward (+)
DW244_RS01585GCF_003433675#DW244_RS01585
HKClassicCurrent focus
101 697-103 037 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000146405#HMPREF9319_RS04880Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2010495
Simplified PFAM architecture for HKOC_2010495
PFAM domain coverage: 176 / 446 aa (39.5%)
1 aa446 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[226-292] | HATPase_c[336-444]
- Domain count: 2
- Matched identifier: HKOC_2010495
- Positioned domains: HisKA 226-292 ; HATPase_c 336-444
Cluster members and taxonomy
Representative gene: GCF_000146405#HMPREF9319_RS04880
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 197 614 · GCF_003433675
AssemblyASM343367v1 · Scaffoldhaploid
Genome composition2 217 913 bp · 37,5% GCStreptococcus pasteurianus
Signal transduction countsGenes 34 · HK 16 · RR 17CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyStreptococcaceaeGenusStreptococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Streptococcaceae7Streptococcus
Related genes
Preview from the same derived genome key