1 HisKA#1
74-136 aa · 63 aa · 21.6% of protein
Raw token
HisKA:74:0.0000000000156:136:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
C7386_RS10815
Histidine kinase, Classic
Agathobaculum butyriciproducens · GCF_003096535
ClassHKTypeClassicLength291 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_003096535#C7386_RS10815Stable P2CS identifier used across views.
GenomeGCF_003096535Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Butyricicoccaceae; Agathobaculum
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length291 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 291 aa (54.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa291 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
183-278 aa · 96 aa · 33.0% of protein
Raw token
HATPase_c:183:9.72e-20:278:97:109- Raw architecture: HisKA:74:0.0000000000156:136:63:64#HATPase_c:183:9.72e-20:278:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_003096535::NZ_QEKJ01000017.1::G00030
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span36773-37648Genomic interval covered by the local TCS group.
Identifiers
Old locus tagC7386_11731RefSeq proteinWP_318261296.1
Context group ID
GCF_003096535::NZ_QEKJ01000017.1::G00030Context members
C7386_RS10815
Partner locus tags
C7386_RS10815
Partner old locus tags
C7386_11731
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_318261296.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagC7386_RS10815Primary locus identifier stored in the genes table.
Old locus tagC7386_11731Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QEKJ01000017.1Sequence record reported by the local genomic context database.
Genomic interval36 773-37 648 nt876 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span36 773-37 648 ntGCF_003096535::NZ_QEKJ01000017.1::G00030
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003096535::NZ_QEKJ01000017.1::G00030Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QEKJ01000017.1All displayed genes belong to this local TCS context.
Neighborhood span36 773-37 648 nt876 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
36 773 nt37 648 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
C7386_RS10815GCF_003096535#C7386_RS10815
HKClassicCurrent focus
36 773-37 648 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003096535#C7386_RS10815The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2895215
Simplified PFAM architecture for HKOC_2895215
PFAM domain coverage: 155 / 291 aa (53.3%)
1 aa291 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[76-136] | HATPase_c[183-276]
- Domain count: 2
- Matched identifier: HKOC_2895215
- Positioned domains: HisKA 76-136 ; HATPase_c 183-276
Cluster members and taxonomy
Representative gene: GCF_003096535#C7386_RS10815
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 628 085 · GCF_003096535
AssemblyASM309653v1 · Scaffoldhaploid
Genome composition2 809 383 bp · 54,0% GCAgathobaculum butyriciproducens
Signal transduction countsGenes 60 · HK 28 · RR 30CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyButyricicoccaceaeGenusAgathobaculum
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Butyricicoccaceae7Agathobaculum
Related genes
Preview from the same derived genome key