1 HisKA#1
191-258 aa · 68 aa · 16.3% of protein
Raw token
HisKA:191:0.0000000000000191:258:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CON35_RS11925
Histidine kinase, Classic
Bacillus cereus · GCF_002553255
ClassHKTypeClassicLength416 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002553255#CON35_RS11925Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length416 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 416 aa (43.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa416 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
303-414 aa · 112 aa · 26.9% of protein
Raw token
HATPase_c:303:8.61e-31:414:112:109- Raw architecture: HisKA:191:0.0000000000000191:258:68:64#HATPase_c:303:8.61e-31:414:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002553255::NZ_NVMR01000059.1::G00048
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span150680-152598Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCON35_11925RefSeq proteinWP_000715829.1
Context group ID
GCF_002553255::NZ_NVMR01000059.1::G00048Context members
CON35_RS11925CON35_RS11930
Partner locus tags
CON35_RS11925CON35_RS11930
Partner old locus tags
CON35_11925CON35_11930
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000715829.1Primary protein accession used for annex mappings.
UniProt accessionW8XXV7Primary UniProt accession resolved in the annex database.
UniProt IDW8XXV7_BACTUDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCON35_RS11925Primary locus identifier stored in the genes table.
Old locus tagCON35_11925Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NVMR01000059.1Sequence record reported by the local genomic context database.
Genomic interval150 680-151 930 nt1 251 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span150 680-152 598 ntGCF_002553255::NZ_NVMR01000059.1::G00048
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002553255::NZ_NVMR01000059.1::G00048Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NVMR01000059.1All displayed genes belong to this local TCS context.
Neighborhood span150 680-152 598 nt1 919 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
150 680 nt152 598 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CON35_RS11925GCF_002553255#CON35_RS11925
HKClassicCurrent focus
150 680-151 930 nt · Reverse (-)
CON35_RS11930GCF_002553255#CON35_RS11930
RROmpR
151 927-152 598 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000160935#BCERE0005_RS02675Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2302303
Simplified PFAM architecture for HKOC_2302303
PFAM domain coverage: 177 / 416 aa (42.5%)
1 aa416 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[192-257] | HATPase_c[303-413]
- Domain count: 2
- Matched identifier: HKOC_2302303
- Positioned domains: HisKA 192-257 ; HATPase_c 303-413
Cluster members and taxonomy
Representative gene: GCF_000160935#BCERE0005_RS02675
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_002553255
AssemblyASM255325v1 · Scaffoldhaploid
Genome composition5 910 033 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 103 · HK 55 · RR 48CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key