1 HisKA#1
160-226 aa · 67 aa · 17.4% of protein
Raw token
HisKA:160:0.0000000000000329:226:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CON06_RS02190
Histidine kinase, Classic
Bacillus cereus · GCF_002550375
ClassHKTypeClassicLength384 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002550375#CON06_RS02190Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length384 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage175 / 384 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa384 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
273-380 aa · 108 aa · 28.1% of protein
Raw token
HATPase_c:273:2.02e-26:380:109:109- Raw architecture: HisKA:160:0.0000000000000329:226:67:64#HATPase_c:273:2.02e-26:380:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002550375::NZ_NVLJ01000004.1::G00046
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span31272-33114Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCON06_02190RefSeq proteinWP_097829200.1
Context group ID
GCF_002550375::NZ_NVLJ01000004.1::G00046Context members
CON06_RS02190CON06_RS02195
Partner locus tags
CON06_RS02190CON06_RS02195
Partner old locus tags
CON06_02190CON06_02195
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_097829200.1Primary protein accession used for annex mappings.
UniProt accessionA0A2B8ST06Primary UniProt accession resolved in the annex database.
UniProt IDA0A2B8ST06_BACCEDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCON06_RS02190Primary locus identifier stored in the genes table.
Old locus tagCON06_02190Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NVLJ01000004.1Sequence record reported by the local genomic context database.
Genomic interval31 272-32 426 nt1 155 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span31 272-33 114 ntGCF_002550375::NZ_NVLJ01000004.1::G00046
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002550375::NZ_NVLJ01000004.1::G00046Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NVLJ01000004.1All displayed genes belong to this local TCS context.
Neighborhood span31 272-33 114 nt1 843 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
31 272 nt33 114 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CON06_RS02190GCF_002550375#CON06_RS02190
HKClassicCurrent focus
31 272-32 426 nt · Reverse (-)
CON06_RS02195GCF_002550375#CON06_RS02195
RROmpR
32 416-33 114 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002550375#CON06_RS02190The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2574032
Simplified PFAM architecture for HKOC_2574032
PFAM domain coverage: 174 / 384 aa (45.3%)
1 aa384 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[160-226] | HATPase_c[274-380]
- Domain count: 2
- Matched identifier: HKOC_2574032
- Positioned domains: HisKA 160-226 ; HATPase_c 274-380
Cluster members and taxonomy
Representative gene: GCF_002550375#CON06_RS02190
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_002550375
AssemblyASM255037v1 · Scaffoldhaploid
Genome composition5 943 482 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 123 · HK 67 · RR 56CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key