1 HisKA#1
160-226 aa · 67 aa · 17.4% of protein
Raw token
HisKA:160:0.000000000000149:226:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
S2E19_RS06685
Histidine kinase, Classic
Bacillus mycoides · GCF_002118175
ClassHKTypeClassicLength385 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002118175#S2E19_RS06685Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length385 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage175 / 385 aa (45.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa385 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
273-380 aa · 108 aa · 28.1% of protein
Raw token
HATPase_c:273:3.13e-27:380:109:109- Raw architecture: HisKA:160:0.000000000000149:226:67:64#HATPase_c:273:3.13e-27:380:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002118175::NZ_MRWV01000002.1::G00031
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span546765-548607Genomic interval covered by the local TCS group.
Identifiers
Old locus tagS2E19_02644RefSeq proteinWP_088037898.1
Context group ID
GCF_002118175::NZ_MRWV01000002.1::G00031Context members
S2E19_RS06680S2E19_RS06685
Partner locus tags
S2E19_RS06680S2E19_RS06685
Partner old locus tags
S2E19_02643S2E19_02644
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_088037898.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagS2E19_RS06685Primary locus identifier stored in the genes table.
Old locus tagS2E19_02644Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MRWV01000002.1Sequence record reported by the local genomic context database.
Genomic interval547 450-548 607 nt1 158 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span546 765-548 607 ntGCF_002118175::NZ_MRWV01000002.1::G00031
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002118175::NZ_MRWV01000002.1::G00031Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MRWV01000002.1All displayed genes belong to this local TCS context.
Neighborhood span546 765-548 607 nt1 843 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
546 765 nt548 607 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
S2E19_RS06680GCF_002118175#S2E19_RS06680
RROmpR
546 765-547 460 nt · Forward (+)
S2E19_RS06685GCF_002118175#S2E19_RS06685
HKClassicCurrent focus
547 450-548 607 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002118175#S2E19_RS06685The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2566120
Simplified PFAM architecture for HKOC_2566120
PFAM domain coverage: 174 / 385 aa (45.2%)
1 aa385 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[160-226] | HATPase_c[274-380]
- Domain count: 2
- Matched identifier: HKOC_2566120
- Positioned domains: HisKA 160-226 ; HATPase_c 274-380
Cluster members and taxonomy
Representative gene: GCF_002118175#S2E19_RS06685
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_002118175
AssemblyASM211817v1 · Contighaploid
Genome composition5 948 174 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 129 · HK 69 · RR 60CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key