1 HisKA#1
234-298 aa · 65 aa · 14.3% of protein
Raw token
HisKA:234:0.000000000033:298:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BJR06_RS08255
Histidine kinase, Classic
Bacillus cereus · GCF_001901245
ClassHKTypeClassicLength453 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001901245#BJR06_RS08255Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length453 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 453 aa (38.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa453 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
344-451 aa · 108 aa · 23.8% of protein
Raw token
HATPase_c:344:5.89e-21:451:108:109- Raw architecture: HisKA:234:0.000000000033:298:65:64#HATPase_c:344:5.89e-21:451:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001901245::NZ_MPOM01000002.1::G00029
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1109642-1111653Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBJR06_08080RefSeq proteinWP_073516051.1
Context group ID
GCF_001901245::NZ_MPOM01000002.1::G00029Context members
BJR06_RS08250BJR06_RS08255
Partner locus tags
BJR06_RS08250BJR06_RS08255
Partner old locus tags
BJR06_08075BJR06_08080
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_073516051.1Primary protein accession used for annex mappings.
UniProt accessionA0ABV4RX65Primary UniProt accession resolved in the annex database.
UniProt IDA0ABV4RX65_9BACIDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBJR06_RS08255Primary locus identifier stored in the genes table.
Old locus tagBJR06_08080Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MPOM01000002.1Sequence record reported by the local genomic context database.
Genomic interval1 110 292-1 111 653 nt1 362 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 109 642-1 111 653 ntGCF_001901245::NZ_MPOM01000002.1::G00029
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001901245::NZ_MPOM01000002.1::G00029Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MPOM01000002.1All displayed genes belong to this local TCS context.
Neighborhood span1 109 642-1 111 653 nt2 012 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 109 642 nt1 111 653 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BJR06_RS08250GCF_001901245#BJR06_RS08250
RROmpR
1 109 642-1 110 304 nt · Forward (+)
BJR06_RS08255GCF_001901245#BJR06_RS08255
HKClassicCurrent focus
1 110 292-1 111 653 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001901245#BJR06_RS08255The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1926819
Simplified PFAM architecture for HKOC_1926819
PFAM domain coverage: 172 / 453 aa (38.0%)
1 aa453 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[234-297] | HATPase_c[344-451]
- Domain count: 2
- Matched identifier: HKOC_1926819
- Positioned domains: HisKA 234-297 ; HATPase_c 344-451
Cluster members and taxonomy
Representative gene: GCF_001901245#BJR06_RS08255
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001901245
AssemblyASM190124v1 · Contighaploid
Genome composition5 926 588 bp · 35,5% GCBacillus cereus
Signal transduction countsGenes 111 · HK 59 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key