1 Response_reg#1
7-119 aa · 113 aa · 49.1% of protein
Raw token
Response_reg:7:1.31e-27:119:113:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAU27_RS23645
Response regulator, unclassified
Bacillus sp. NH11B · GCF_001884205
ClassRRTypeunclassifiedLength230 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_001884205#BAU27_RS23645Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length230 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage113 / 230 aa (49.1%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa230 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:7:1.31e-27:119:113:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_001884205::NZ_MAOG01000130.1::G00053
Group size11 locus tag listed below.
HK / RR0 / 1Counts resolved for the local TCS neighborhood.
Context span26471-27163Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBAU27_13640RefSeq proteinWP_071772138.1
Context group ID
GCF_001884205::NZ_MAOG01000130.1::G00053Context members
BAU27_RS23645
Partner locus tags
BAU27_RS23645
Partner old locus tags
BAU27_13640
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_071772138.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAU27_RS23645Primary locus identifier stored in the genes table.
Old locus tagBAU27_13640Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MAOG01000130.1Sequence record reported by the local genomic context database.
Genomic interval26 471-27 163 nt693 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span26 471-27 163 ntGCF_001884205::NZ_MAOG01000130.1::G00053
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001884205::NZ_MAOG01000130.1::G00053Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MAOG01000130.1All displayed genes belong to this local TCS context.
Neighborhood span26 471-27 163 nt693 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
26 471 nt27 163 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BAU27_RS23645GCF_001884205#BAU27_RS23645
RRunclassifiedCurrent focus
26 471-27 163 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001884205#BAU27_RS23645The current gene is the representative for this cluster.
PFAM architectureResponse_reg + HTH_642 domains in the representative PFAM annotation.
PFAM architecture for RROC_1207113
Simplified PFAM architecture for RROC_1207113
PFAM domain coverage: 158 / 230 aa (68.7%)
1 aa230 aa
Response_regHTH_64
- Simplified architecture: Response_reg + HTH_64
- Raw architecture: Response_reg[7-117] | HTH_64[179-225]
- Domain count: 2
- Matched identifier: RROC_1207113
- Positioned domains: Response_reg 7-117 ; Response_reg 7-117 ; HTH_64 179-225 ; HTH_64 179-225
Cluster members and taxonomy
Representative gene: GCF_001884205#BAU27_RS23645
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 866 314 · GCF_001884205
AssemblyASM188420v1 · Contighaploid
Genome composition5 836 127 bp · 35,0% GCBacillus sp. NH11B
Signal transduction countsGenes 119 · HK 65 · RR 54CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key