1 HisKA#1
188-248 aa · 61 aa · 15.2% of protein
Raw token
HisKA:188:0.000000000000493:248:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAQ49_RS07190
Histidine kinase, Classic
Bacillus proteolyticus · GCF_001884065
ClassHKTypeClassicLength402 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_001884065#BAQ49_RS07190Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length402 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage165 / 402 aa (41.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa402 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
294-397 aa · 104 aa · 25.9% of protein
Raw token
HATPase_c:294:1.84e-24:397:107:109- Raw architecture: HisKA:188:0.000000000000493:248:61:64#HATPase_c:294:1.84e-24:397:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_001884065::NZ_MACH01000054.1::G00030
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span166717-167925Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBAQ49_25650RefSeq proteinWP_071744769.1
Context group ID
GCF_001884065::NZ_MACH01000054.1::G00030Context members
BAQ49_RS07190
Partner locus tags
BAQ49_RS07190
Partner old locus tags
BAQ49_25650
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_071744769.1Primary protein accession used for annex mappings.
UniProt accessionA0AA44KY39Primary UniProt accession resolved in the annex database.
UniProt IDA0AA44KY39_9BACIDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAQ49_RS07190Primary locus identifier stored in the genes table.
Old locus tagBAQ49_25650Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MACH01000054.1Sequence record reported by the local genomic context database.
Genomic interval166 717-167 925 nt1 209 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span166 717-167 925 ntGCF_001884065::NZ_MACH01000054.1::G00030
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001884065::NZ_MACH01000054.1::G00030Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MACH01000054.1All displayed genes belong to this local TCS context.
Neighborhood span166 717-167 925 nt1 209 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
166 717 nt167 925 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BAQ49_RS07190GCF_001884065#BAQ49_RS07190
HKClassicCurrent focus
166 717-167 925 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001884065#BAQ49_RS07190The current gene is the representative for this cluster.
PFAM architecture5TM-5TMR_LYT + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2423753
Simplified PFAM architecture for HKOC_2423753
PFAM domain coverage: 315 / 402 aa (78.4%)
1 aa402 aa
5TM-5TMR_LYTHisKAHATPase_c
- Simplified architecture: 5TM-5TMR_LYT + HisKA + HATPase_c
- Raw architecture: 5TM-5TMR_LYT[16-165] | HisKA[188-248] | HATPase_c[295-398]
- Domain count: 3
- Matched identifier: HKOC_2423753
- Positioned domains: 5TM-5TMR_LYT 16-165 ; HisKA 188-248 ; HATPase_c 295-398
Cluster members and taxonomy
Representative gene: GCF_001884065#BAQ49_RS07190
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 026 192 · GCF_001884065
AssemblyASM188406v1 · Contigreference genome · haploid
Genome composition5 859 329 bp · 35,0% GCBacillus proteolyticus
Signal transduction countsGenes 118 · HK 65 · RR 53CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key