1 HisKA_3#1
502-562 aa · 61 aa · 8.6% of protein
Raw token
HisKA_3:502:0.00000191:562:65:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAQ49_RS03225
Histidine kinase, Classic
Bacillus proteolyticus · GCF_001884065
ClassHKTypeClassicLength713 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001884065#BAQ49_RS03225Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length713 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage158 / 713 aa (22.2%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa713 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
603-699 aa · 97 aa · 13.6% of protein
Raw token
HATPase_c:603:1.24e-20:699:107:109- Raw architecture: HisKA_3:502:0.00000191:562:65:68#HATPase_c:603:1.24e-20:699:107:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001884065::NZ_MACH01000020.1::G00016
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span7719-10440Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBAQ49_21880RefSeq proteinWP_001244598.1
Context group ID
GCF_001884065::NZ_MACH01000020.1::G00016Context members
BAQ49_RS03220BAQ49_RS03225
Partner locus tags
BAQ49_RS03220BAQ49_RS03225
Partner old locus tags
BAQ49_21875BAQ49_21880
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_001244598.1Primary protein accession used for annex mappings.
UniProt accessionA0AA44R994Primary UniProt accession resolved in the annex database.
UniProt IDA0AA44R994_9BACIDisplay identifier provided by UniProt.
GO / PubMed3 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAQ49_RS03225Primary locus identifier stored in the genes table.
Old locus tagBAQ49_21880Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MACH01000020.1Sequence record reported by the local genomic context database.
Genomic interval8 299-10 440 nt2 142 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span7 719-10 440 ntGCF_001884065::NZ_MACH01000020.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001884065::NZ_MACH01000020.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MACH01000020.1All displayed genes belong to this local TCS context.
Neighborhood span7 719-10 440 nt2 722 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
7 719 nt10 440 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BAQ49_RS03220GCF_001884065#BAQ49_RS03220
RRNarL
7 719-8 327 nt · Reverse (-)
BAQ49_RS03225GCF_001884065#BAQ49_RS03225
HKClassicCurrent focus
8 299-10 440 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001884065#BAQ49_RS03225The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_0745748
Simplified PFAM architecture for HKOC_0745748
PFAM domain coverage: 95 / 713 aa (13.3%)
1 aa713 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[605-699]
- Domain count: 1
- Matched identifier: HKOC_0745748
- Positioned domains: HATPase_c 605-699
Cluster members and taxonomy
Representative gene: GCF_001884065#BAQ49_RS03225
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 026 192 · GCF_001884065
AssemblyASM188406v1 · Contigreference genome · haploid
Genome composition5 859 329 bp · 35,0% GCBacillus proteolyticus
Signal transduction countsGenes 118 · HK 65 · RR 53CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key