1 HisKA#1
208-271 aa · 64 aa · 15.3% of protein
Raw token
HisKA:208:0.00000000000417:271:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
B4082_RS02150
Histidine kinase, Classic
Bacillus cereus · GCF_001619425
ClassHKTypeClassicLength417 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_001619425#B4082_RS02150Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length417 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage168 / 417 aa (40.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
313-416 aa · 104 aa · 24.9% of protein
Raw token
HATPase_c:313:6.6e-23:416:107:109- Raw architecture: HisKA:208:0.00000000000417:271:64:64#HATPase_c:313:6.6e-23:416:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_001619425::NZ_LJKA01000004.1::G00053
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span20796-22049Genomic interval covered by the local TCS group.
Identifiers
Old locus tagB4082_0432RefSeq proteinWP_063221215.1
Context group ID
GCF_001619425::NZ_LJKA01000004.1::G00053Context members
B4082_RS02150
Partner locus tags
B4082_RS02150
Partner old locus tags
B4082_0432
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_063221215.1Primary protein accession used for annex mappings.
UniProt accessionA0A161TFU3Primary UniProt accession resolved in the annex database.
UniProt IDA0A161TFU3_BACCEDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagB4082_RS02150Primary locus identifier stored in the genes table.
Old locus tagB4082_0432Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LJKA01000004.1Sequence record reported by the local genomic context database.
Genomic interval20 796-22 049 nt1 254 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span20 796-22 049 ntGCF_001619425::NZ_LJKA01000004.1::G00053
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001619425::NZ_LJKA01000004.1::G00053Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LJKA01000004.1All displayed genes belong to this local TCS context.
Neighborhood span20 796-22 049 nt1 254 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
20 796 nt22 049 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
B4082_RS02150GCF_001619425#B4082_RS02150
HKClassicCurrent focus
20 796-22 049 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001619425#B4082_RS02150The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2294367
Simplified PFAM architecture for HKOC_2294367
PFAM domain coverage: 168 / 417 aa (40.3%)
1 aa417 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[208-271] | HATPase_c[313-416]
- Domain count: 2
- Matched identifier: HKOC_2294367
- Positioned domains: HisKA 208-271 ; HATPase_c 313-416
Cluster members and taxonomy
Representative gene: GCF_001619425#B4082_RS02150
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001619425
AssemblyASM161942v1 · Scaffoldhaploid
Genome composition5 717 535 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 120 · HK 66 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key