1 HisKA#1
124-170 aa · 47 aa · 14.4% of protein
Raw token
HisKA:124:0.00000584:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AT280_RS03050
Histidine kinase, Classic
Bacillus cereus · GCF_001583855
ClassHKTypeClassicLength327 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001583855#AT280_RS03050Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length327 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 327 aa (47.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa327 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.0% of protein
Raw token
HATPase_c:217:1.96e-28:324:108:109- Raw architecture: HisKA:124:0.00000584:170:53:64#HATPase_c:217:1.96e-28:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001583855::NZ_LOQC01000004.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span6680-8367Genomic interval covered by the local TCS group.
Identifiers
Old locus tagAT280_02150RefSeq proteinWP_001994395.1
Context group ID
GCF_001583855::NZ_LOQC01000004.1::G00004Context members
AT280_RS03045AT280_RS03050
Partner locus tags
AT280_RS03045AT280_RS03050
Partner old locus tags
AT280_02145AT280_02150
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_001994395.1Primary protein accession used for annex mappings.
UniProt accessionA0ABD4LHZ2Primary UniProt accession resolved in the annex database.
UniProt IDA0ABD4LHZ2_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAT280_RS03050Primary locus identifier stored in the genes table.
Old locus tagAT280_02150Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LOQC01000004.1Sequence record reported by the local genomic context database.
Genomic interval7 384-8 367 nt984 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span6 680-8 367 ntGCF_001583855::NZ_LOQC01000004.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001583855::NZ_LOQC01000004.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LOQC01000004.1All displayed genes belong to this local TCS context.
Neighborhood span6 680-8 367 nt1 688 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
6 680 nt8 367 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AT280_RS03045GCF_001583855#AT280_RS03045
RROmpR
6 680-7 387 nt · Forward (+)
AT280_RS03050GCF_001583855#AT280_RS03050
HKClassicCurrent focus
7 384-8 367 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000239195#BCF_RS12810Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2861305
Simplified PFAM architecture for HKOC_2861305
PFAM domain coverage: 108 / 327 aa (33.0%)
1 aa327 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-324]
- Domain count: 1
- Matched identifier: HKOC_2861305
- Positioned domains: HATPase_c 217-324
Cluster members and taxonomy
Representative gene: GCF_000239195#BCF_RS12810
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001583855
AssemblyASM158385v1 · Contighaploid
Genome composition5 663 643 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 112 · HK 58 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key