1 HisKA#1
229-293 aa · 65 aa · 14.0% of protein
Raw token
HisKA:229:0.0000000000442:293:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA71_RS14280
Histidine kinase, Classic
Blautia wexlerae · GCF_001404735
ClassHKTypeClassicLength464 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001404735#ARA71_RS14280Stable P2CS identifier used across views.
GenomeGCF_001404735Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length464 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 464 aa (38.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa464 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
343-455 aa · 113 aa · 24.4% of protein
Raw token
HATPase_c:343:1.69e-20:455:113:109- Raw architecture: HisKA:229:0.0000000000442:293:65:64#HATPase_c:343:1.69e-20:455:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001404735::NZ_CZAW01000034.1::G00045
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span37297-39383Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852523_02895RefSeq proteinWP_055056066.1
Context group ID
GCF_001404735::NZ_CZAW01000034.1::G00045Context members
ARA71_RS14275ARA71_RS14280
Partner locus tags
ARA71_RS14275ARA71_RS14280
Partner old locus tags
ERS852523_02894ERS852523_02895
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055056066.1Primary protein accession used for annex mappings.
UniProt accessionA0A174PCK8Primary UniProt accession resolved in the annex database.
UniProt IDA0A174PCK8_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA71_RS14280Primary locus identifier stored in the genes table.
Old locus tagERS852523_02895Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CZAW01000034.1Sequence record reported by the local genomic context database.
Genomic interval37 989-39 383 nt1 395 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span37 297-39 383 ntGCF_001404735::NZ_CZAW01000034.1::G00045
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001404735::NZ_CZAW01000034.1::G00045Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CZAW01000034.1All displayed genes belong to this local TCS context.
Neighborhood span37 297-39 383 nt2 087 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
37 297 nt39 383 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ARA71_RS14275GCF_001404735#ARA71_RS14275
RROmpR
37 297-37 989 nt · Forward (+)
ARA71_RS14280GCF_001404735#ARA71_RS14280
HKClassicCurrent focus
37 989-39 383 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001404735#ARA71_RS14280The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1784964
Simplified PFAM architecture for HKOC_1784964
PFAM domain coverage: 176 / 464 aa (37.9%)
1 aa464 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[230-293] | HATPase_c[343-454]
- Domain count: 2
- Matched identifier: HKOC_1784964
- Positioned domains: HisKA 230-293 ; HATPase_c 343-454
Cluster members and taxonomy
Representative gene: GCF_001404735#ARA71_RS14280
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_001404735
Assembly14207_7#34 · Scaffoldhaploid
Genome composition4 829 031 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 174 · HK 87 · RR 86CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key