1 HisKA#1
134-186 aa · 53 aa · 14.7% of protein
Raw token
HisKA:134:0.00000927:186:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AMO22_RS08250
Histidine kinase, Classic
Bacillus paranthracis · GCF_001117785
ClassHKTypeClassicLength360 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001117785#AMO22_RS08250Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length360 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 360 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa360 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-344 aa · 111 aa · 30.8% of protein
Raw token
HATPase_c:234:3.18e-24:344:111:109- Raw architecture: HisKA:134:0.00000927:186:53:64#HATPase_c:234:3.18e-24:344:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001117785::NZ_CMPU01000028.1::G00021
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span19935-21714Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS232495_01662RefSeq proteinWP_000864967.1
Context group ID
GCF_001117785::NZ_CMPU01000028.1::G00021Context members
AMO22_RS08250AMO22_RS08255
Partner locus tags
AMO22_RS08250AMO22_RS08255
Partner old locus tags
ERS232495_01662ERS232495_01663
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000864967.1Primary protein accession used for annex mappings.
UniProt accessionA0A5M9GV28Primary UniProt accession resolved in the annex database.
UniProt IDA0A5M9GV28_9BACIDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAMO22_RS08250Primary locus identifier stored in the genes table.
Old locus tagERS232495_01662Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CMPU01000028.1Sequence record reported by the local genomic context database.
Genomic interval19 935-21 017 nt1 083 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span19 935-21 714 ntGCF_001117785::NZ_CMPU01000028.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001117785::NZ_CMPU01000028.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CMPU01000028.1All displayed genes belong to this local TCS context.
Neighborhood span19 935-21 714 nt1 780 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
19 935 nt21 714 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AMO22_RS08250GCF_001117785#AMO22_RS08250
HKClassicCurrent focus
19 935-21 017 nt · Reverse (-)
AMO22_RS08255GCF_001117785#AMO22_RS08255
RROmpR
21 007-21 714 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000971535#OA45_RS10445Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2747505
Simplified PFAM architecture for HKOC_2747505
PFAM domain coverage: 112 / 360 aa (31.1%)
1 aa360 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[234-345]
- Domain count: 1
- Matched identifier: HKOC_2747505
- Positioned domains: HATPase_c 234-345
Cluster members and taxonomy
Representative gene: GCF_000971535#OA45_RS10445
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 026 186 · GCF_001117785
Assembly9803_7#66 · Scaffoldhaploid
Genome composition5 641 962 bp · 35,5% GCBacillus paranthracis
Signal transduction countsGenes 83 · HK 42 · RR 40CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key