1 HisKA#1
116-170 aa · 55 aa · 17.0% of protein
Raw token
HisKA:116:0.00000346:170:57:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DR81_RS06125
Histidine kinase, Classic
Francisella tularensis · GCF_000742095
ClassHKTypeClassicLength323 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000742095#DR81_RS06125Stable P2CS identifier used across views.
GenomeGCF_000742095Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length323 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 323 aa (49.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa323 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
219-322 aa · 104 aa · 32.2% of protein
Raw token
HATPase_c:219:1.17e-23:322:104:109- Raw architecture: HisKA:116:0.00000346:170:57:64#HATPase_c:219:1.17e-23:322:104:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000742095::NZ_KN046815.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span546329-548039Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDR81_568RefSeq proteinWP_003025142.1
Context group ID
GCF_000742095::NZ_KN046815.1::G00001Context members
DR81_RS06130DR81_RS06125
Partner locus tags
DR81_RS06130DR81_RS06125
Partner old locus tags
DR81_567DR81_568
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_003025142.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDR81_RS06125Primary locus identifier stored in the genes table.
Old locus tagDR81_568Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KN046815.1Sequence record reported by the local genomic context database.
Genomic interval547 068-548 039 nt972 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span546 329-548 039 ntGCF_000742095::NZ_KN046815.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000742095::NZ_KN046815.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KN046815.1All displayed genes belong to this local TCS context.
Neighborhood span546 329-548 039 nt1 711 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
546 329 nt548 039 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DR81_RS06130GCF_000742095#DR81_RS06130
RROmpR
546 329-547 018 nt · Forward (+)
DR81_RS06125GCF_000742095#DR81_RS06125
HKClassicCurrent focus
547 068-548 039 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000016105#FTW_RS01880Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2866064
Simplified PFAM architecture for HKOC_2866064
PFAM domain coverage: 105 / 323 aa (32.5%)
1 aa323 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[218-322]
- Domain count: 1
- Matched identifier: HKOC_2866064
- Positioned domains: HATPase_c 218-322
Cluster members and taxonomy
Representative gene: GCF_000016105#FTW_RS01880
Displayed with 5 columns and 10 rows per page from the local display config.
Showing members 1 to 32 over 32 total members. Page 1 / 1.
GCF_000016105#FTW_RS01880 (representative) | ||||
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 263 · GCF_000742095
AssemblyASM74209v1 · Scaffoldhaploid
Genome composition1 818 461 bp · 32,5% GCFrancisella tularensis
Signal transduction countsGenes 5 · HK 3 · RR 2CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomPseudomonadatiPhylumPseudomonadotaClassGammaproteobacteriaOrderThiotrichalesFamilyFrancisellaceaeGenusFrancisella
Lineage path7 lineage nodes
1Bacteria2Pseudomonadati3Pseudomonadota4Gammaproteobacteria5Thiotrichales6Francisellaceae7Francisella
Related genes
Preview from the same derived genome key