1 HisKA#1
202-260 aa · 59 aa · 13.9% of protein
Raw token
HisKA:202:0.000000000534:260:59:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
G599_RS0107635
Histidine kinase, Classic
Blautia wexlerae AGR2146 · GCF_000424085
ClassHKTypeClassicLength423 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000424085#G599_RS0107635Stable P2CS identifier used across views.
GenomeGCF_000424085Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length423 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 423 aa (40.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa423 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
311-423 aa · 113 aa · 26.7% of protein
Raw token
HATPase_c:311:1.52e-29:423:113:109- Raw architecture: HisKA:202:0.000000000534:260:59:64#HATPase_c:311:1.52e-29:423:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000424085::NZ_AUJF01000026.1::G00010
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span12716-14652Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000424085::NZ_AUJF01000026.1::G00010Context members
G599_RS0107635G599_RS0107640
Partner locus tags
G599_RS0107635G599_RS0107640
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_026649115.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagG599_RS0107635Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_AUJF01000026.1Sequence record reported by the local genomic context database.
Genomic interval12 716-13 987 nt1 272 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span12 716-14 652 ntGCF_000424085::NZ_AUJF01000026.1::G00010
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000424085::NZ_AUJF01000026.1::G00010Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AUJF01000026.1All displayed genes belong to this local TCS context.
Neighborhood span12 716-14 652 nt1 937 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
12 716 nt14 652 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
G599_RS0107635GCF_000424085#G599_RS0107635
HKClassicCurrent focus
12 716-13 987 nt · Reverse (-)
G599_RS0107640GCF_000424085#G599_RS0107640
RROmpR
13 993-14 652 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000424085#G599_RS0107635The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2235819
Simplified PFAM architecture for HKOC_2235819
PFAM domain coverage: 167 / 423 aa (39.5%)
1 aa423 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[204-260] | HATPase_c[312-421]
- Domain count: 2
- Matched identifier: HKOC_2235819
- Positioned domains: HisKA 204-260 ; HATPase_c 312-421
Cluster members and taxonomy
Representative gene: GCF_000424085#G599_RS0107635
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 280 691 · GCF_000424085
AssemblyASM42408v1 · Scaffoldhaploid
Genome composition3 583 102 bp · 41,5% GCBlautia wexlerae AGR2146
Signal transduction countsGenes 67 · HK 29 · RR 34CheA 0 · PP 4
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key