1 HisKA#1
124-170 aa · 47 aa · 14.4% of protein
Raw token
HisKA:124:0.00000891:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IG9_RS00970
Histidine kinase, Classic
Bacillus cereus HuA2-9 · GCF_000398985
ClassHKTypeClassicLength327 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000398985#IG9_RS00970Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length327 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 327 aa (47.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.0% of protein
Raw token
HATPase_c:217:1.88e-27:324:108:109- Raw architecture: HisKA:124:0.00000891:170:53:64#HATPase_c:217:1.88e-27:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000398985::NZ_KB976152.1::G00006
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span207296-208983Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIG9_00202RefSeq proteinWP_016091484.1
Context group ID
GCF_000398985::NZ_KB976152.1::G00006Context members
IG9_RS00970IG9_RS00975
Partner locus tags
IG9_RS00970IG9_RS00975
Partner old locus tags
IG9_00202IG9_00203
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_016091484.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIG9_RS00970Primary locus identifier stored in the genes table.
Old locus tagIG9_00202Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KB976152.1Sequence record reported by the local genomic context database.
Genomic interval207 296-208 279 nt984 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span207 296-208 983 ntGCF_000398985::NZ_KB976152.1::G00006
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000398985::NZ_KB976152.1::G00006Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KB976152.1All displayed genes belong to this local TCS context.
Neighborhood span207 296-208 983 nt1 688 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
207 296 nt208 983 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
IG9_RS00970GCF_000398985#IG9_RS00970
HKClassicCurrent focus
207 296-208 279 nt · Reverse (-)
IG9_RS00975GCF_000398985#IG9_RS00975
RROmpR
208 276-208 983 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000398985#IG9_RS00970The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2861345
Simplified PFAM architecture for HKOC_2861345
PFAM domain coverage: 108 / 327 aa (33.0%)
1 aa327 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-324]
- Domain count: 1
- Matched identifier: HKOC_2861345
- Positioned domains: HATPase_c 217-324
Cluster members and taxonomy
Representative gene: GCF_000398985#IG9_RS00970
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 204 · GCF_000398985
AssemblyBaci_cere_HuA2-9_V1 · Scaffoldhaploid
Genome composition5 837 558 bp · 35,0% GCBacillus cereus HuA2-9
Signal transduction countsGenes 121 · HK 66 · RR 55CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key