1 HisKA_3#1
177-244 aa · 68 aa · 18.5% of protein
Raw token
HisKA_3:177:5.94e-20:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BABF1_RS08685
Histidine kinase, Classic
Bacillus anthracis str. BF1 · GCF_000295695
ClassHKTypeClassicLength368 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000295695#BABF1_RS08685Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length368 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 368 aa (39.4%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa368 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 20.9% of protein
Raw token
HATPase_c:289:0.000000185:365:97:109- Raw architecture: HisKA_3:177:5.94e-20:244:68:68#HATPase_c:289:0.000000185:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000295695::NZ_CP047131.1::G00020
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1660632-1662381Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBABF1_008685RefSeq proteinWP_000397668.1
Context group ID
GCF_000295695::NZ_CP047131.1::G00020Context members
BABF1_RS08680BABF1_RS08685
Partner locus tags
BABF1_RS08680BABF1_RS08685
Partner old locus tags
BABF1_008680BABF1_008685
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000397668.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBABF1_RS08685Primary locus identifier stored in the genes table.
Old locus tagBABF1_008685Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP047131.1Sequence record reported by the local genomic context database.
Genomic interval1 661 275-1 662 381 nt1 107 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 660 632-1 662 381 ntGCF_000295695::NZ_CP047131.1::G00020
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000295695::NZ_CP047131.1::G00020Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP047131.1All displayed genes belong to this local TCS context.
Neighborhood span1 660 632-1 662 381 nt1 750 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 660 632 nt1 662 381 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BABF1_RS08680GCF_000295695#BABF1_RS08680
RRNarL
1 660 632-1 661 270 nt · Forward (+)
BABF1_RS08685GCF_000295695#BABF1_RS08685
HKClassicCurrent focus
1 661 275-1 662 381 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000295695#BABF1_RS08685The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2698201
Simplified PFAM architecture for HKOC_2698201
PFAM domain coverage: 67 / 368 aa (18.2%)
1 aa368 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2698201
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_000295695#BABF1_RS08685
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 213 182 · GCF_000295695
AssemblyASM29569v2 · Complete Genomehaploid
Genome composition5 490 208 bp · 35,0% GCBacillus anthracis str. BF1
Signal transduction countsGenes 96 · HK 45 · RR 50CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key