1 HisKA#1
191-258 aa · 68 aa · 16.3% of protein
Raw token
HisKA:191:0.000000000000052:258:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BABF1_RS03025
Histidine kinase, Classic
Bacillus anthracis str. BF1 · GCF_000295695
ClassHKTypeClassicLength416 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000295695#BABF1_RS03025Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length416 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 416 aa (43.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa416 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
303-414 aa · 112 aa · 26.9% of protein
Raw token
HATPase_c:303:1.16e-30:414:112:109- Raw architecture: HisKA:191:0.000000000000052:258:68:64#HATPase_c:303:1.16e-30:414:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000295695::NZ_CP047131.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span565644-567562Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBABF1_003025RefSeq proteinWP_001984707.1
Context group ID
GCF_000295695::NZ_CP047131.1::G00004Context members
BABF1_RS03020BABF1_RS03025
Partner locus tags
BABF1_RS03020BABF1_RS03025
Partner old locus tags
BABF1_003020BABF1_003025
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_001984707.1Primary protein accession used for annex mappings.
UniProt accessionQ6HNP0Primary UniProt accession resolved in the annex database.
UniProt IDQ6HNP0_BACHKDisplay identifier provided by UniProt.
GO / PubMed5 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBABF1_RS03025Primary locus identifier stored in the genes table.
Old locus tagBABF1_003025Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP047131.1Sequence record reported by the local genomic context database.
Genomic interval566 312-567 562 nt1 251 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span565 644-567 562 ntGCF_000295695::NZ_CP047131.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000295695::NZ_CP047131.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP047131.1All displayed genes belong to this local TCS context.
Neighborhood span565 644-567 562 nt1 919 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
565 644 nt567 562 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BABF1_RS03020GCF_000295695#BABF1_RS03020
RROmpR
565 644-566 315 nt · Forward (+)
BABF1_RS03025GCF_000295695#BABF1_RS03025
HKClassicCurrent focus
566 312-567 562 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000008505#BT9727_RS02935Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2302228
Simplified PFAM architecture for HKOC_2302228
PFAM domain coverage: 177 / 416 aa (42.5%)
1 aa416 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[192-257] | HATPase_c[303-413]
- Domain count: 2
- Matched identifier: HKOC_2302228
- Positioned domains: HisKA 192-257 ; HATPase_c 303-413
Cluster members and taxonomy
Representative gene: GCF_000008505#BT9727_RS02935
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 213 182 · GCF_000295695
AssemblyASM29569v2 · Complete Genomehaploid
Genome composition5 490 208 bp · 35,0% GCBacillus anthracis str. BF1
Signal transduction countsGenes 96 · HK 45 · RR 50CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key