1 HisKA#1
271-333 aa · 63 aa · 12.7% of protein
Raw token
HisKA:271:0.000000209:333:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IE7_RS17010
Histidine kinase, Classic
Bacillus cereus BAG4O-1 · GCF_000291435
ClassHKTypeClassicLength496 aaTM0ValidatedNoCompleteYesContexttriad
Gene IDGCF_000291435#IE7_RS17010Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length496 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 496 aa (35.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa496 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
380-490 aa · 111 aa · 22.4% of protein
Raw token
HATPase_c:380:7.15e-17:490:111:109- Raw architecture: HisKA:271:0.000000209:333:63:64#HATPase_c:380:7.15e-17:490:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labeltriadGCF_000291435::NZ_JH791942.1::G00043
Group size33 locus tags listed below.
HK / RR2 / 1Counts resolved for the local TCS neighborhood.
Context span3406719-3410420Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIE7_03343RefSeq proteinWP_000479027.1
Context group ID
GCF_000291435::NZ_JH791942.1::G00043Context members
IE7_RS17005IE7_RS17010IE7_RS17015
Partner locus tags
IE7_RS17005IE7_RS17010IE7_RS17015
Partner old locus tags
IE7_03342IE7_03343IE7_03344
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000479027.1Primary protein accession used for annex mappings.
UniProt accessionA0A9X7G6Z1Primary UniProt accession resolved in the annex database.
UniProt IDA0A9X7G6Z1_BACCEDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIE7_RS17010Primary locus identifier stored in the genes table.
Old locus tagIE7_03343Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH791942.1Sequence record reported by the local genomic context database.
Genomic interval3 408 248-3 409 738 nt1 491 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span3 406 719-3 410 420 ntGCF_000291435::NZ_JH791942.1::G00043
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000291435::NZ_JH791942.1::G00043Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labeltriadNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH791942.1All displayed genes belong to this local TCS context.
Neighborhood span3 406 719-3 410 420 nt3 702 nt
Members31 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
3 406 719 nt3 410 420 nt
Neighborhood gene cards
3 genes in the current local neighborhood.
IE7_RS17005GCF_000291435#IE7_RS17005
HKClassic
3 406 719-3 408 248 nt · Reverse (-)
IE7_RS17010GCF_000291435#IE7_RS17010
HKClassicCurrent focus
3 408 248-3 409 738 nt · Reverse (-)
IE7_RS17015GCF_000291435#IE7_RS17015
RROmpR
3 409 713-3 410 420 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000291435#IE7_RS17010The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_1498826
Simplified PFAM architecture for HKOC_1498826
PFAM domain coverage: 109 / 496 aa (22.0%)
1 aa496 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[381-489]
- Domain count: 1
- Matched identifier: HKOC_1498826
- Positioned domains: HATPase_c 381-489
Cluster members and taxonomy
Representative gene: GCF_000291435#IE7_RS17010
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 185 · GCF_000291435
AssemblyBaci_cere_BAG4O-1_G13205_V1 · Scaffoldhaploid
Genome composition5 726 356 bp · 35,0% GCBacillus cereus BAG4O-1
Signal transduction countsGenes 110 · HK 60 · RR 50CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key