1 HisKA_3#1
149-216 aa · 68 aa · 19.4% of protein
Raw token
HisKA_3:149:1.01e-22:216:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAO_RS11845
Histidine kinase, Classic
Bacillus anthracis str. A0174 · GCF_000182055
ClassHKTypeClassicLength351 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000182055#BAO_RS11845Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length351 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 351 aa (45.3%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa351 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
252-342 aa · 91 aa · 25.9% of protein
Raw token
HATPase_c:252:7.32e-16:342:106:109- Raw architecture: HisKA_3:149:1.01e-22:216:68:68#HATPase_c:252:7.32e-16:342:106:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000182055::NZ_ABLT01000006.1::G00031
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span40344-42028Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBAO_1449RefSeq proteinWP_000744313.1
Context group ID
GCF_000182055::NZ_ABLT01000006.1::G00031Context members
BAO_RS11840BAO_RS11845
Partner locus tags
BAO_RS11840BAO_RS11845
Partner old locus tags
BAO_1450BAO_1449
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000744313.1Primary protein accession used for annex mappings.
UniProt accessionA0AAC8ND17Primary UniProt accession resolved in the annex database.
UniProt IDA0AAC8ND17_BACANDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAO_RS11845Primary locus identifier stored in the genes table.
Old locus tagBAO_1449Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_ABLT01000006.1Sequence record reported by the local genomic context database.
Genomic interval40 973-42 028 nt1 056 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span40 344-42 028 ntGCF_000182055::NZ_ABLT01000006.1::G00031
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000182055::NZ_ABLT01000006.1::G00031Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_ABLT01000006.1All displayed genes belong to this local TCS context.
Neighborhood span40 344-42 028 nt1 685 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
40 344 nt42 028 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BAO_RS11840GCF_000182055#BAO_RS11840
RRNarL
40 344-40 976 nt · Reverse (-)
BAO_RS11845GCF_000182055#BAO_RS11845
HKClassicCurrent focus
40 973-42 028 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007845#BA_RS07160Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2792518
Simplified PFAM architecture for HKOC_2792518
PFAM domain coverage: 160 / 351 aa (45.6%)
1 aa351 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[149-216] | HATPase_c[252-343]
- Domain count: 2
- Matched identifier: HKOC_2792518
- Positioned domains: HisKA_3 149-216 ; HATPase_c 252-343
Cluster members and taxonomy
Representative gene: GCF_000007845#BA_RS07160
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 486 622 · GCF_000182055
AssemblyASM18205v1 · Scaffoldhaploid
Genome composition5 291 908 bp · 35,0% GCBacillus anthracis str. A0174
Signal transduction countsGenes 92 · HK 43 · RR 48CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key