1 HisKA#1
286-348 aa · 63 aa · 12.7% of protein
Raw token
HisKA:286:0.0000000000000134:348:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAGC_RS27510
Histidine kinase, Classic
Bacillus anthracis str. A1055 · GCF_000167255
ClassHKTypeClassicLength498 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000167255#BAGC_RS27510Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length498 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage167 / 498 aa (33.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa498 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
394-497 aa · 104 aa · 20.9% of protein
Raw token
HATPase_c:394:4.26e-29:497:107:109- Raw architecture: HisKA:286:0.0000000000000134:348:63:64#HATPase_c:394:4.26e-29:497:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000167255::NZ_AAEO01000037.1::G00001
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span78930-80426Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000167255::NZ_AAEO01000037.1::G00001Context members
BAGC_RS27510
Partner locus tags
BAGC_RS27510
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000669133.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAGC_RS27510Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_AAEO01000037.1Sequence record reported by the local genomic context database.
Genomic interval78 930-80 426 nt1 497 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span78 930-80 426 ntGCF_000167255::NZ_AAEO01000037.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000167255::NZ_AAEO01000037.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AAEO01000037.1All displayed genes belong to this local TCS context.
Neighborhood span78 930-80 426 nt1 497 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
78 930 nt80 426 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BAGC_RS27510GCF_000167255#BAGC_RS27510
HKClassicCurrent focus
78 930-80 426 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000167255#BAGC_RS27510The current gene is the representative for this cluster.
PFAM architectureDUF3149 + dCache_1 + HisKA + HATPase_c4 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1487060
Simplified PFAM architecture for HKOC_1487060
PFAM domain coverage: 352 / 498 aa (70.7%)
1 aa498 aa
DUF3149dCache_1HisKAHATPase_c
- Simplified architecture: DUF3149 + dCache_1 + HisKA + HATPase_c
- Raw architecture: DUF3149[1-38] | dCache_1[61-208] | HisKA[286-347] | HATPase_c[393-496]
- Domain count: 4
- Matched identifier: HKOC_1487060
- Positioned domains: DUF3149 1-38 ; dCache_1 61-208 ; HisKA 286-347 ; HATPase_c 393-496
Cluster members and taxonomy
Representative gene: GCF_000167255#BAGC_RS27510
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 280 355 · GCF_000167255
AssemblyASM16725v1 · Scaffoldhaploid
Genome composition5 370 618 bp · 35,5% GCBacillus anthracis str. A1055
Signal transduction countsGenes 96 · HK 48 · RR 48CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key