1 HisKA#1
124-170 aa · 47 aa · 14.5% of protein
Raw token
HisKA:124:0.00000803:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BTHUR0005_RS12065
Histidine kinase, Classic
Bacillus thuringiensis serovar pakistani str. T13001 · GCF_000161555
ClassHKTypeClassicLength324 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000161555#BTHUR0005_RS12065Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length324 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 324 aa (47.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa324 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.3% of protein
Raw token
HATPase_c:217:1.08e-27:324:108:109- Raw architecture: HisKA:124:0.00000803:170:53:64#HATPase_c:217:1.08e-27:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000161555::NZ_CM000750.1::G00034
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span2295892-2297570Genomic interval covered by the local TCS group.
Identifiers
Old locus tagbthur0005_23310RefSeq proteinWP_002178119.1
Context group ID
GCF_000161555::NZ_CM000750.1::G00034Context members
BTHUR0005_RS12060BTHUR0005_RS12065
Partner locus tags
BTHUR0005_RS12060BTHUR0005_RS12065
Partner old locus tags
bthur0005_23300bthur0005_23310
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002178119.1Primary protein accession used for annex mappings.
UniProt accessionA0A9X0JY05Primary UniProt accession resolved in the annex database.
UniProt IDA0A9X0JY05_BACTUDisplay identifier provided by UniProt.
GO / PubMed5 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBTHUR0005_RS12065Primary locus identifier stored in the genes table.
Old locus tagbthur0005_23310Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CM000750.1Sequence record reported by the local genomic context database.
Genomic interval2 296 596-2 297 570 nt975 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span2 295 892-2 297 570 ntGCF_000161555::NZ_CM000750.1::G00034
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000161555::NZ_CM000750.1::G00034Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CM000750.1All displayed genes belong to this local TCS context.
Neighborhood span2 295 892-2 297 570 nt1 679 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
2 295 892 nt2 297 570 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BTHUR0005_RS12060GCF_000161555#BTHUR0005_RS12060
RROmpR
2 295 892-2 296 599 nt · Forward (+)
BTHUR0005_RS12065GCF_000161555#BTHUR0005_RS12065
HKClassicCurrent focus
2 296 596-2 297 570 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000161555#BTHUR0005_RS12065The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2865119
Simplified PFAM architecture for HKOC_2865119
PFAM domain coverage: 107 / 324 aa (33.0%)
1 aa324 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-323]
- Domain count: 1
- Matched identifier: HKOC_2865119
- Positioned domains: HATPase_c 217-323
Cluster members and taxonomy
Representative gene: GCF_000161555#BTHUR0005_RS12065
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 527 027 · GCF_000161555
AssemblyASM16155v1 · Chromosomehaploid
Genome composition6 037 513 bp · 35,0% GCBacillus thuringiensis serovar pakistani str. T13001
Signal transduction countsGenes 109 · HK 58 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key