1 H_kinase_N#1
9-147 aa · 139 aa · 38.7% of protein
Raw token
H_kinase_N:9:2.09e-37:147:140:139P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
HMPREF0346_RS06930
Probable incomplete histidine kinase
Enterococcus faecalis EnGen0297 · GCF_000160155
ClassHKTypeClassicLength359 aaTM0ValidatedNoCompleteNoContextNo local context
Gene IDGCF_000160155#HMPREF0346_RS06930Stable P2CS identifier used across views.
GenomeGCF_000160155Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Selected clusterNo clusterThis gene is not linked to a local CD-HIT cluster.
External referencesMIST4 HMPREF0346_RS06930MIST4
Domain signature
Compact overview inferred from the domain field
H_kinase_NHisKA_2
Protein length359 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage214 / 359 aa (59.6%)Merged over positioned domains only.
Domain description1 H_kinase_N,1 HisKA_2Summary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa359 aa
Domain-by-domain annotation2 items
2 HisKA_2#2
280-354 aa · 75 aa · 20.9% of protein
Raw token
HisKA_2:280:1.54e-27:354:76:76- Raw architecture: H_kinase_N:9:2.09e-37:147:140:139#HisKA_2:280:1.54e-27:354:76:76
- Domain description: 1 H_kinase_N,1 HisKA_2
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: No
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
No local TCS context mapping is available for this gene.
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No external UniProt / GO / PubMed mapping is available for this gene.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagHMPREF0346_RS06930Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconUnavailableNo contig or replicon mapping is available for this gene.
Genomic intervalUnavailableNo start/end genomic coordinates are available for this gene.
StrandUnavailableStrand sign follows the local context database convention.
Local TCS group spanUnavailableNo grouped neighborhood span is available for this gene.
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
No local TCS neighborhood is available for this gene on this server.
Clusters
CD-HIT memberships and selected cluster details for the current gene class
No cluster membership available for this gene.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 491 075 · GCF_000160155
AssemblyASM16015v1 · Scaffoldhaploid
Genome composition3 129 930 bp · 37,0% GCEnterococcus faecalis EnGen0297
Signal transduction countsGenes 31 · HK 14 · RR 17CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key