1 HisKA#1
162-229 aa · 68 aa · 17.3% of protein
Raw token
HisKA:162:0.0000000000000581:229:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EFBG_RS13705
Histidine kinase, Classic
Enterococcus faecalis T2 · GCF_000157155
ClassHKTypeClassicLength393 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000157155#EFBG_RS13705Stable P2CS identifier used across views.
GenomeGCF_000157155Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length393 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 393 aa (45.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa393 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
275-386 aa · 112 aa · 28.5% of protein
Raw token
HATPase_c:275:1.31e-29:386:113:109- Raw architecture: HisKA:162:0.0000000000000581:229:68:64#HATPase_c:275:1.31e-29:386:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000157155::NZ_GG692850.1::G00008
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span5857-7717Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEFBG_02550RefSeq proteinWP_025186162.1
Context group ID
GCF_000157155::NZ_GG692850.1::G00008Context members
EFBG_RS13700EFBG_RS13705
Partner locus tags
EFBG_RS13700EFBG_RS13705
Partner old locus tags
EFBG_02549EFBG_02550
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_025186162.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEFBG_RS13705Primary locus identifier stored in the genes table.
Old locus tagEFBG_02550Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_GG692850.1Sequence record reported by the local genomic context database.
Genomic interval6 536-7 717 nt1 182 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span5 857-7 717 ntGCF_000157155::NZ_GG692850.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000157155::NZ_GG692850.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_GG692850.1All displayed genes belong to this local TCS context.
Neighborhood span5 857-7 717 nt1 861 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
5 857 nt7 717 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EFBG_RS13700GCF_000157155#EFBG_RS13700
RROmpR
5 857-6 546 nt · Forward (+)
EFBG_RS13705GCF_000157155#EFBG_RS13705
HKClassicCurrent focus
6 536-7 717 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000157155#EFBG_RS13705The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2503308
Simplified PFAM architecture for HKOC_2503308
PFAM domain coverage: 177 / 393 aa (45.0%)
1 aa393 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[163-228] | HATPase_c[275-385]
- Domain count: 2
- Matched identifier: HKOC_2503308
- Positioned domains: HisKA 163-228 ; HATPase_c 275-385
Cluster members and taxonomy
Representative gene: GCF_000157155#EFBG_RS13705
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 565 637 · GCF_000157155
AssemblyASM15715v1 · Scaffoldhaploid
Genome composition3 263 835 bp · 37,0% GCEnterococcus faecalis T2
Signal transduction countsGenes 28 · HK 13 · RR 15CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key