1 His_kinase#1
56-133 aa · 78 aa · 30.4% of protein
Raw token
His_kinase:56:3.06e-23:133:78:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BT9727_RS22165
Histidine kinase, Classic
[Bacillus thuringiensis] serovar konkukian str. 97-27 · GCF_000008505
ClassHKTypeClassicLength257 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000008505#BT9727_RS22165Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length257 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 257 aa (66.9%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa257 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
152-245 aa · 94 aa · 36.6% of protein
Raw token
HATPase_c:152:0.000000931:245:107:109- Raw architecture: His_kinase:56:3.06e-23:133:78:80#HATPase_c:152:0.000000931:245:107:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000008505::NC_005957.1::G00047
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span4300225-4301690Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBT9727_4236RefSeq proteinWP_000958975.1
Context group ID
GCF_000008505::NC_005957.1::G00047Context members
BT9727_RS22165BT9727_RS22170
Partner locus tags
BT9727_RS22165BT9727_RS22170
Partner old locus tags
BT9727_4236BT9727_4237
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000958975.1Primary protein accession used for annex mappings.
UniProt accessionQ6HD24Primary UniProt accession resolved in the annex database.
UniProt IDQ6HD24_BACHKDisplay identifier provided by UniProt.
GO / PubMed2 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBT9727_RS22165Primary locus identifier stored in the genes table.
Old locus tagBT9727_4236Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_005957.1Sequence record reported by the local genomic context database.
Genomic interval4 300 225-4 300 998 nt774 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span4 300 225-4 301 690 ntGCF_000008505::NC_005957.1::G00047
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000008505::NC_005957.1::G00047Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_005957.1All displayed genes belong to this local TCS context.
Neighborhood span4 300 225-4 301 690 nt1 466 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
4 300 225 nt4 301 690 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BT9727_RS22165GCF_000008505#BT9727_RS22165
HKClassicCurrent focus
4 300 225-4 300 998 nt · Forward (+)
BT9727_RS22170GCF_000008505#BT9727_RS22170
RRunclassified
4 300 995-4 301 690 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000008505#BT9727_RS22165The current gene is the representative for this cluster.
PFAM architectureHis_kinase1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2916033
Simplified PFAM architecture for HKOC_2916033
PFAM domain coverage: 77 / 257 aa (30.0%)
1 aa257 aa
His_kinase
- Simplified architecture: His_kinase
- Raw architecture: His_kinase[57-133]
- Domain count: 1
- Matched identifier: HKOC_2916033
- Positioned domains: His_kinase 57-133
Cluster members and taxonomy
Representative gene: GCF_000008505#BT9727_RS22165
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 281 309 · GCF_000008505
AssemblyASM850v1 · Complete Genomehaploid
Genome composition5 314 794 bp · 35,5% GC[Bacillus thuringiensis] serovar konkukian str. 97-27
Signal transduction countsGenes 109 · HK 58 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key