1 HisKA_3#1
178-241 aa · 64 aa · 17.0% of protein
Raw token
HisKA_3:178:1.08e-23:241:64:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BA_RS26385
Histidine kinase, Classic
Bacillus anthracis str. Ames · GCF_000007845
ClassHKTypeClassicLength376 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000007845#BA_RS26385Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length376 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage150 / 376 aa (39.9%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa376 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
282-367 aa · 86 aa · 22.9% of protein
Raw token
HATPase_c:282:0.00000000000314:367:104:109- Raw architecture: HisKA_3:178:1.08e-23:241:64:68#HATPase_c:282:0.00000000000314:367:104:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000007845::NC_003997.3::G00053
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span5082658-5084387Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBA5598%2CBA_5598RefSeq proteinWP_000570616.1
Context group ID
GCF_000007845::NC_003997.3::G00053Context members
BA_RS26380BA_RS26385
Partner locus tags
BA_RS26380BA_RS26385
Partner old locus tags
BA5597%2CBA_5597BA5598%2CBA_5598
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000570616.1Primary protein accession used for annex mappings.
UniProt accessionA0AAC8N8B1Primary UniProt accession resolved in the annex database.
UniProt IDA0AAC8N8B1_BACANDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBA_RS26385Primary locus identifier stored in the genes table.
Old locus tagBA5598%2CBA_5598Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_003997.3Sequence record reported by the local genomic context database.
Genomic interval5 083 257-5 084 387 nt1 131 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span5 082 658-5 084 387 ntGCF_000007845::NC_003997.3::G00053
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000007845::NC_003997.3::G00053Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_003997.3All displayed genes belong to this local TCS context.
Neighborhood span5 082 658-5 084 387 nt1 730 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
5 082 658 nt5 084 387 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BA_RS26380GCF_000007845#BA_RS26380
RRNarL
5 082 658-5 083 260 nt · Reverse (-)
BA_RS26385GCF_000007845#BA_RS26385
HKClassicCurrent focus
5 083 257-5 084 387 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007845#BA_RS26385The current gene is the representative for this cluster.
PFAM architectureDesK_N + HisKA_3 + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2641400
Simplified PFAM architecture for HKOC_2641400
PFAM domain coverage: 296 / 376 aa (78.7%)
1 aa376 aa
DesK_NHisKA_3HATPase_c
- Simplified architecture: DesK_N + HisKA_3 + HATPase_c
- Raw architecture: DesK_N[4-149] | HisKA_3[178-241] | HATPase_c[280-365]
- Domain count: 3
- Matched identifier: HKOC_2641400
- Positioned domains: DesK_N 4-149 ; HisKA_3 178-241 ; HATPase_c 280-365
Cluster members and taxonomy
Representative gene: GCF_000007845#BA_RS26385
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 198 094 · GCF_000007845
AssemblyASM784v1 · Complete Genomehaploid
Genome composition5 227 293 bp · 35,5% GCBacillus anthracis str. Ames
Signal transduction countsGenes 94 · HK 46 · RR 47CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key