1 HisKA#1
191-258 aa · 68 aa · 16.3% of protein
Raw token
HisKA:191:0.000000000000025:258:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BC_RS02875
Histidine kinase, Classic
Bacillus cereus ATCC 14579 · GCF_000007825
ClassHKTypeClassicLength416 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000007825#BC_RS02875Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length416 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 416 aa (43.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa416 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
303-414 aa · 112 aa · 26.9% of protein
Raw token
HATPase_c:303:8.75e-31:414:112:109- Raw architecture: HisKA:191:0.000000000000025:258:68:64#HATPase_c:303:8.75e-31:414:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000007825::NC_004722.1::G00004
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span555741-557659Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBC0573%2CBC_0573RefSeq proteinWP_000715835.1
Context group ID
GCF_000007825::NC_004722.1::G00004Context members
BC_RS02870BC_RS02875
Partner locus tags
BC_RS02870BC_RS02875
Partner old locus tags
BC0572%2CBC_0572BC0573%2CBC_0573
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000715835.1Primary protein accession used for annex mappings.
UniProt accessionQ81I46Primary UniProt accession resolved in the annex database.
UniProt IDQ81I46_BACCRDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBC_RS02875Primary locus identifier stored in the genes table.
Old locus tagBC0573%2CBC_0573Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_004722.1Sequence record reported by the local genomic context database.
Genomic interval556 409-557 659 nt1 251 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span555 741-557 659 ntGCF_000007825::NC_004722.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000007825::NC_004722.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_004722.1All displayed genes belong to this local TCS context.
Neighborhood span555 741-557 659 nt1 919 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
555 741 nt557 659 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BC_RS02870GCF_000007825#BC_RS02870
RROmpR
555 741-556 412 nt · Forward (+)
BC_RS02875GCF_000007825#BC_RS02875
HKClassicCurrent focus
556 409-557 659 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007825#BC_RS02875The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2302226
Simplified PFAM architecture for HKOC_2302226
PFAM domain coverage: 177 / 416 aa (42.5%)
1 aa416 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[192-257] | HATPase_c[303-413]
- Domain count: 2
- Matched identifier: HKOC_2302226
- Positioned domains: HisKA 192-257 ; HATPase_c 303-413
Cluster members and taxonomy
Representative gene: GCF_000007825#BC_RS02875
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 226 900 · GCF_000007825
AssemblyASM782v1 · Complete Genomehaploid
Genome composition5 427 083 bp · 35,5% GCBacillus cereus ATCC 14579
Signal transduction countsGenes 98 · HK 54 · RR 44CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key