1 HisKA#1
90-143 aa · 54 aa · 17.6% of protein
Raw token
HisKA:90:0.000000017:143:54:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACESN3_RS03780
Histidine kinase, Classic
Anaerostipes hadrus · GCF_964239225
ClassHKTypeClassicLength306 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_964239225#ACESN3_RS03780Stable P2CS identifier used across views.
GenomeGCF_964239225Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Anaerostipes
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length306 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage161 / 306 aa (52.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa306 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
195-301 aa · 107 aa · 35.0% of protein
Raw token
HATPase_c:195:6.38e-25:301:107:109- Raw architecture: HisKA:90:0.000000017:143:54:64#HATPase_c:195:6.38e-25:301:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_964239225::NZ_CAXSPF010000004.1::G00006
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span68622-70229Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_964239225::NZ_CAXSPF010000004.1::G00006Context members
ACESN3_RS03775ACESN3_RS03780
Partner locus tags
ACESN3_RS03775ACESN3_RS03780
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_009265197.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACESN3_RS03780Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_CAXSPF010000004.1Sequence record reported by the local genomic context database.
Genomic interval69 309-70 229 nt921 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span68 622-70 229 ntGCF_964239225::NZ_CAXSPF010000004.1::G00006
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_964239225::NZ_CAXSPF010000004.1::G00006Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CAXSPF010000004.1All displayed genes belong to this local TCS context.
Neighborhood span68 622-70 229 nt1 608 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
68 622 nt70 229 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ACESN3_RS03775GCF_964239225#ACESN3_RS03775
RROmpR
68 622-69 308 nt · Forward (+)
ACESN3_RS03780GCF_964239225#ACESN3_RS03780
HKClassicCurrent focus
69 309-70 229 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013302475#G4926_RS03035Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2881535
Simplified PFAM architecture for HKOC_2881535
PFAM domain coverage: 166 / 306 aa (54.2%)
1 aa306 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[89-147] | HATPase_c[196-302]
- Domain count: 2
- Matched identifier: HKOC_2881535
- Positioned domains: HisKA 89-147 ; HATPase_c 196-302
Cluster members and taxonomy
Representative gene: GCF_013302475#G4926_RS03035
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 649 756 · GCF_964239225
AssemblyCC00691 · Scaffoldhaploid
Genome composition3 259 310 bp · 37,0% GCAnaerostipes hadrus
Signal transduction countsGenes 49 · HK 23 · RR 24CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusAnaerostipes
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Anaerostipes
Related genes
Preview from the same derived genome key