1 PBPb#1
47-264 aa · 218 aa · 22.8% of protein
Raw token
PBPb:47:2.02e-32:264:229:219P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QV722_RS05145
Histidine kinase, Hybrid
uncultured Blautia sp. · GCF_943912995
ClassHKTypeHybridLength956 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_943912995#QV722_RS05145Stable P2CS identifier used across views.
GenomeGCF_943912995Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
PBPbHisKAHATPase_cResponse_reg
Protein length956 aaLength used to scale native and Biotite-like views.
Annotated domains55 with usable coordinates.
Domain coverage724 / 956 aa (75.7%)Merged over positioned domains only.
Domain description2 PBPb,1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa956 aa
Domain-by-domain annotation5 items
2 PBPb#2
286-490 aa · 205 aa · 21.4% of protein
Raw token
PBPb:286:4.26e-16:490:215:2193 HisKA#3
575-640 aa · 66 aa · 6.9% of protein
Raw token
HisKA:575:1.35e-17:640:66:644 HATPase_c#4
687-804 aa · 118 aa · 12.3% of protein
Raw token
HATPase_c:687:4e-31:804:119:1095 Response_reg#5
830-946 aa · 117 aa · 12.2% of protein
Raw token
Response_reg:830:2.6e-30:946:117:111- Raw architecture: PBPb:47:2.02e-32:264:229:219#PBPb:286:4.26e-16:490:215:219#HisKA:575:1.35e-17:640:66:64#HATPase_c:687:4e-31:804:119:109#Response_reg:830:2.6e-30:946:117:111
- Domain description: 2 PBPb,1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_943912995::NZ_CALTWP010000027.1::G00019
Group size22 locus tags listed below.
HK / RR2 / 0Counts resolved for the local TCS neighborhood.
Context span888-6636Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_943912995::NZ_CALTWP010000027.1::G00019Context members
QV722_RS05140QV722_RS05145
Partner locus tags
QV722_RS05140QV722_RS05145
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_288836691.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQV722_RS05145Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_CALTWP010000027.1Sequence record reported by the local genomic context database.
Genomic interval3 766-6 636 nt2 871 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span888-6 636 ntGCF_943912995::NZ_CALTWP010000027.1::G00019
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_943912995::NZ_CALTWP010000027.1::G00019Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CALTWP010000027.1All displayed genes belong to this local TCS context.
Neighborhood span888-6 636 nt5 749 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
888 nt6 636 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QV722_RS05140GCF_943912995#QV722_RS05140
HKHybrid
888-3 662 nt · Forward (+)
QV722_RS05145GCF_943912995#QV722_RS05145
HKHybridCurrent focus
3 766-6 636 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_943912995#QV722_RS05145The current gene is the representative for this cluster.
PFAM architectureSBP_bac_3 + HisKA + HATPase_c + Response_reg4 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0321849
Simplified PFAM architecture for HKOC_0321849
PFAM domain coverage: 510 / 956 aa (53.3%)
1 aa956 aa
SBP_bac_3HisKAHATPase_cResponse_reg
- Simplified architecture: SBP_bac_3 + HisKA + HATPase_c + Response_reg
- Raw architecture: SBP_bac_3[55-265] | HisKA[575-640] | HATPase_c[687-802] | Response_reg[830-946]
- Domain count: 4
- Matched identifier: HKOC_0321849
- Positioned domains: SBP_bac_3 55-265 ; HisKA 575-640 ; HATPase_c 687-802 ; Response_reg 830-946
Cluster members and taxonomy
Representative gene: GCF_943912995#QV722_RS05145
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 765 821 · GCF_943912995
AssemblyAUYp17LyRY_bin.21.MAG · Contighaploid
Genome composition3 936 508 bp · 41,5% GCuncultured Blautia sp.
Signal transduction countsGenes 103 · HK 53 · RR 49CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key