1 HisKA#1
286-352 aa · 67 aa · 12.7% of protein
Raw token
HisKA:286:2.82e-18:352:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
FY298_RS03800
Histidine kinase, Classic
Anaerofustis stercorihominis · GCF_902373745
ClassHKTypeClassicLength526 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_902373745#FY298_RS03800Stable P2CS identifier used across views.
GenomeGCF_902373745Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length526 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage185 / 526 aa (35.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa526 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
400-517 aa · 118 aa · 22.4% of protein
Raw token
HATPase_c:400:2.73e-29:517:119:109- Raw architecture: HisKA:286:2.82e-18:352:67:64#HATPase_c:400:2.73e-29:517:119:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_902373745::NZ_CABKNJ010000001.1::G00008
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span768186-770559Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_902373745::NZ_CABKNJ010000001.1::G00008Context members
FY298_RS03800FY298_RS11500
Partner locus tags
FY298_RS03800FY298_RS11500
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007050584.1Primary protein accession used for annex mappings.
UniProt accessionB1C9P8Primary UniProt accession resolved in the annex database.
UniProt IDB1C9P8_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagFY298_RS03800Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_CABKNJ010000001.1Sequence record reported by the local genomic context database.
Genomic interval768 186-769 766 nt1 581 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span768 186-770 559 ntGCF_902373745::NZ_CABKNJ010000001.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_902373745::NZ_CABKNJ010000001.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CABKNJ010000001.1All displayed genes belong to this local TCS context.
Neighborhood span768 186-770 559 nt2 374 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
768 186 nt770 559 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
FY298_RS03800GCF_902373745#FY298_RS03800
HKClassicCurrent focus
768 186-769 766 nt · Forward (+)
FY298_RS11500GCF_902373745#FY298_RS11500
RRFrzZ
769 801-770 559 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS08425Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1370535
Simplified PFAM architecture for HKOC_1370535
PFAM domain coverage: 184 / 526 aa (35.0%)
1 aa526 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[286-352] | HATPase_c[400-516]
- Domain count: 2
- Matched identifier: HKOC_1370535
- Positioned domains: HisKA 286-352 ; HATPase_c 400-516
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS08425
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_902373745
AssemblyMGYG-HGUT-01305 · Scaffoldhaploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key