1 HisKA_3#1
177-244 aa · 68 aa · 18.6% of protein
Raw token
HisKA_3:177:1.28e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ABH964_RS02860
Histidine kinase, Classic
Bacillus sp. RC92 · GCF_044908975
ClassHKTypeClassicLength366 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_044908975#ABH964_RS02860Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 366 aa (39.6%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa366 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 21.0% of protein
Raw token
HATPase_c:289:0.000000000199:365:97:109- Raw architecture: HisKA_3:177:1.28e-19:244:68:68#HATPase_c:289:0.000000000199:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_044908975::NZ_JBIYDU010000001.1::G00010
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span531464-533207Genomic interval covered by the local TCS group.
Identifiers
Old locus tagABH964_000567RefSeq proteinWP_340851090.1
Context group ID
GCF_044908975::NZ_JBIYDU010000001.1::G00010Context members
ABH964_RS02855ABH964_RS02860
Partner locus tags
ABH964_RS02855ABH964_RS02860
Partner old locus tags
ABH964_000566ABH964_000567
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_340851090.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagABH964_RS02860Primary locus identifier stored in the genes table.
Old locus tagABH964_000567Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBIYDU010000001.1Sequence record reported by the local genomic context database.
Genomic interval532 107-533 207 nt1 101 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span531 464-533 207 ntGCF_044908975::NZ_JBIYDU010000001.1::G00010
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_044908975::NZ_JBIYDU010000001.1::G00010Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBIYDU010000001.1All displayed genes belong to this local TCS context.
Neighborhood span531 464-533 207 nt1 744 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
531 464 nt533 207 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ABH964_RS02855GCF_044908975#ABH964_RS02855
RRNarL
531 464-532 102 nt · Forward (+)
ABH964_RS02860GCF_044908975#ABH964_RS02860
HKClassicCurrent focus
532 107-533 207 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_038003645#MHH59_RS08790Use this link to inspect the representative gene detail.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2716579
Simplified PFAM architecture for HKOC_2716579
PFAM domain coverage: 67 / 366 aa (18.3%)
1 aa366 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2716579
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_038003645#MHH59_RS08790
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 156 293 · GCF_044908975
AssemblyASM4490897v1 · Contighaploid
Genome composition5 692 938 bp · 35,0% GCBacillus sp. RC92
Signal transduction countsGenes 141 · HK 76 · RR 65CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key