1 HisKA#1
117-169 aa · 53 aa · 16.2% of protein
Raw token
HisKA:117:0.000000359:169:59:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ABH949_RS10580
Histidine kinase, Classic
Bacillus sp. RC230 · GCF_044908795
ClassHKTypeClassicLength328 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_044908795#ABH949_RS10580Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length328 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage163 / 328 aa (49.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa328 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
215-324 aa · 110 aa · 33.5% of protein
Raw token
HATPase_c:215:2.63e-27:324:110:109- Raw architecture: HisKA:117:0.000000359:169:59:64#HATPase_c:215:2.63e-27:324:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_044908795::NZ_JBIYDO010000003.1::G00020
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span444621-446311Genomic interval covered by the local TCS group.
Identifiers
Old locus tagABH949_002104RefSeq proteinWP_078179054.1
Context group ID
GCF_044908795::NZ_JBIYDO010000003.1::G00020Context members
ABH949_RS10580ABH949_RS10585
Partner locus tags
ABH949_RS10580ABH949_RS10585
Partner old locus tags
ABH949_002104ABH949_002105
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_078179054.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagABH949_RS10580Primary locus identifier stored in the genes table.
Old locus tagABH949_002104Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBIYDO010000003.1Sequence record reported by the local genomic context database.
Genomic interval444 621-445 607 nt987 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span444 621-446 311 ntGCF_044908795::NZ_JBIYDO010000003.1::G00020
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_044908795::NZ_JBIYDO010000003.1::G00020Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBIYDO010000003.1All displayed genes belong to this local TCS context.
Neighborhood span444 621-446 311 nt1 691 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
444 621 nt446 311 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ABH949_RS10580GCF_044908795#ABH949_RS10580
HKClassicCurrent focus
444 621-445 607 nt · Reverse (-)
ABH949_RS10585GCF_044908795#ABH949_RS10585
RROmpR
445 604-446 311 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002014545#BW891_RS25185Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2859785
Simplified PFAM architecture for HKOC_2859785
PFAM domain coverage: 110 / 328 aa (33.5%)
1 aa328 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[216-325]
- Domain count: 1
- Matched identifier: HKOC_2859785
- Positioned domains: HATPase_c 216-325
Cluster members and taxonomy
Representative gene: GCF_002014545#BW891_RS25185
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 156 283 · GCF_044908795
AssemblyASM4490879v1 · Contighaploid
Genome composition5 828 371 bp · 35,0% GCBacillus sp. RC230
Signal transduction countsGenes 139 · HK 75 · RR 64CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key