1 HisKA#1
257-323 aa · 67 aa · 14.0% of protein
Raw token
HisKA:257:0.00000000207:323:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ABH946_RS08295
Histidine kinase, Classic
Bacillus sp. RC145 · GCF_044908195
ClassHKTypeClassicLength479 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_044908195#ABH946_RS08295Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length479 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 479 aa (37.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa479 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
368-478 aa · 111 aa · 23.2% of protein
Raw token
HATPase_c:368:5.35e-21:478:112:109- Raw architecture: HisKA:257:0.00000000207:323:67:64#HATPase_c:368:5.35e-21:478:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_044908195::NZ_JBIYCX010000003.1::G00018
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span354827-356909Genomic interval covered by the local TCS group.
Identifiers
Old locus tagABH946_001673RefSeq proteinWP_002129818.1
Context group ID
GCF_044908195::NZ_JBIYCX010000003.1::G00018Context members
ABH946_RS08295ABH946_RS08300
Partner locus tags
ABH946_RS08295ABH946_RS08300
Partner old locus tags
ABH946_001673ABH946_001674
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002129818.1Primary protein accession used for annex mappings.
UniProt accessionA0AAP8H259Primary UniProt accession resolved in the annex database.
UniProt IDA0AAP8H259_BACMYDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagABH946_RS08295Primary locus identifier stored in the genes table.
Old locus tagABH946_001673Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBIYCX010000003.1Sequence record reported by the local genomic context database.
Genomic interval354 827-356 266 nt1 440 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span354 827-356 909 ntGCF_044908195::NZ_JBIYCX010000003.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_044908195::NZ_JBIYCX010000003.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBIYCX010000003.1All displayed genes belong to this local TCS context.
Neighborhood span354 827-356 909 nt2 083 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
354 827 nt356 909 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ABH946_RS08295GCF_044908195#ABH946_RS08295
HKClassicCurrent focus
354 827-356 266 nt · Reverse (-)
ABH946_RS08300GCF_044908195#ABH946_RS08300
RROmpR
356 244-356 909 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000003925#BMYCO0001_RS22735Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1628155
Simplified PFAM architecture for HKOC_1628155
PFAM domain coverage: 174 / 479 aa (36.3%)
1 aa479 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[258-322] | HATPase_c[369-477]
- Domain count: 2
- Matched identifier: HKOC_1628155
- Positioned domains: HisKA 258-322 ; HATPase_c 369-477
Cluster members and taxonomy
Representative gene: GCF_000003925#BMYCO0001_RS22735
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 156 280 · GCF_044908195
AssemblyASM4490819v1 · Contighaploid
Genome composition5 815 492 bp · 35,0% GCBacillus sp. RC145
Signal transduction countsGenes 136 · HK 72 · RR 64CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key