1 HisKA#1
163-222 aa · 60 aa · 16.1% of protein
Raw token
HisKA:163:0.000000000000422:222:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ABH965_RS01270
Histidine kinase, Classic
Bacillus sp. RC97 · GCF_044907985
ClassHKTypeClassicLength372 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_044907985#ABH965_RS01270Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length372 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage165 / 372 aa (44.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
266-370 aa · 105 aa · 28.2% of protein
Raw token
HATPase_c:266:2.61e-20:370:109:109- Raw architecture: HisKA:163:0.000000000000422:222:61:64#HATPase_c:266:2.61e-20:370:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_044907985::NZ_JBIYCQ010000001.1::G00003
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span254481-255599Genomic interval covered by the local TCS group.
Identifiers
Old locus tagABH965_000261RefSeq proteinWP_002127244.1
Context group ID
GCF_044907985::NZ_JBIYCQ010000001.1::G00003Context members
ABH965_RS01270
Partner locus tags
ABH965_RS01270
Partner old locus tags
ABH965_000261
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002127244.1Primary protein accession used for annex mappings.
UniProt accessionA0AAP8GS45Primary UniProt accession resolved in the annex database.
UniProt IDA0AAP8GS45_BACMYDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagABH965_RS01270Primary locus identifier stored in the genes table.
Old locus tagABH965_000261Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBIYCQ010000001.1Sequence record reported by the local genomic context database.
Genomic interval254 481-255 599 nt1 119 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span254 481-255 599 ntGCF_044907985::NZ_JBIYCQ010000001.1::G00003
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_044907985::NZ_JBIYCQ010000001.1::G00003Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBIYCQ010000001.1All displayed genes belong to this local TCS context.
Neighborhood span254 481-255 599 nt1 119 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
254 481 nt255 599 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ABH965_RS01270GCF_044907985#ABH965_RS01270
HKClassicCurrent focus
254 481-255 599 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000291315#IEY_RS16330Use this link to inspect the representative gene detail.
PFAM architectureHisK_N + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2670416
Simplified PFAM architecture for HKOC_2670416
PFAM domain coverage: 292 / 372 aa (78.5%)
1 aa372 aa
HisK_NHisKAHATPase_c
- Simplified architecture: HisK_N + HisKA + HATPase_c
- Raw architecture: HisK_N[11-139] | HisKA[163-222] | HATPase_c[269-371]
- Domain count: 3
- Matched identifier: HKOC_2670416
- Positioned domains: HisK_N 11-139 ; HisKA 163-222 ; HATPase_c 269-371
Cluster members and taxonomy
Representative gene: GCF_000291315#IEY_RS16330
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 156 294 · GCF_044907985
AssemblyASM4490798v1 · Contighaploid
Genome composition5 809 416 bp · 35,0% GCBacillus sp. RC97
Signal transduction countsGenes 140 · HK 75 · RR 65CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key